FB2024_04 , released June 25, 2024
Gene: Dmel\aos
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General Information
Symbol
Dmel\aos
Species
D. melanogaster
Name
argos
Annotation Symbol
CG4531
Feature Type
FlyBase ID
FBgn0004569
Gene Model Status
Stock Availability
Gene Summary
Regulates cell determination; development of ommatidia and optic lobe. Is a signaling molecule involved in the process of axon pathfinding in the eye. Part of the Ras pathway regulating programmed cell death in pupal eyes; activated by lozenge (lz). Antagonist for the Egfr receptor (gurken). Inhibits Egfr signaling without interacting directly with the receptor, but instead by sequestering the Egfr-activating ligand spitz (spi). (UniProt, Q00805)
Contribute a Gene Snapshot for this gene.
Also Known As

rlt, gil, roulette, sty, arg

Key Links
Genomic Location
Cytogenetic map
Sequence location
Recombination map
3-44
RefSeq locus
NT_037436 REGION:16470386..16483650
Sequence
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
Function
Gene Ontology (GO) Annotations (20 terms)
Molecular Function (3 terms)
Terms Based on Experimental Evidence (3 terms)
CV Term
Evidence
References
inferred from direct assay
inferred from mutant phenotype
inferred from physical interaction with FLYBASE:spi; FB:FBgn0005672
inferred from direct assay
inferred from mutant phenotype
Terms Based on Predictions or Assertions (0 terms)
Biological Process (16 terms)
Terms Based on Experimental Evidence (16 terms)
CV Term
Evidence
References
inferred from mutant phenotype
inferred from mutant phenotype
involved_in eye development
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from genetic interaction with FLYBASE:Egfr; FB:FBgn0003731
inferred from genetic interaction with FLYBASE:Ubx; FB:FBgn0003944
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Terms Based on Predictions or Assertions (0 terms)
Cellular Component (1 term)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
inferred from direct assay
Terms Based on Predictions or Assertions (0 terms)
Gene Group (FlyBase)
Protein Family (UniProt)
-
Summaries
Pathway (FlyBase)
Negative Regulators of EGFR Signaling Pathway -
Negative regulators of Epidermal Growth Factor Receptor signaling down-regulate the pathway, suppressing the activation of ERK kinase (rl) or acting on downstream effectors.
Protein Function (UniProtKB)
Regulates cell determination; development of ommatidia and optic lobe. Is a signaling molecule involved in the process of axon pathfinding in the eye. Part of the Ras pathway regulating programmed cell death in pupal eyes; activated by lozenge (lz). Antagonist for the Egfr receptor (gurken). Inhibits Egfr signaling without interacting directly with the receptor, but instead by sequestering the Egfr-activating ligand spitz (spi).
(UniProt, Q00805)
Summary (Interactive Fly)

ligand for Egf receptor - inhibitor of Egfr activation - controls formation of embryonic brain neuroblasts by regulating neuroectodermal progenitor cells

Gene Model and Products
Number of Transcripts
1
Number of Unique Polypeptides
1

Please see the JBrowse view of Dmel\aos for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Structure
Protein 3D structure   (Predicted by AlphaFold)   (AlphaFold entry Q00805)

If you don't see a structure in the viewer, refresh your browser.
Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures
Crossreferences
PDB - An information portal to biological macromolecular structures
Comments on Gene Model

Gene model reviewed during 5.45

Sequence Ontology: Class of Gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
FBtr0075408
2822
444
Additional Transcript Data and Comments
Reported size (kB)

4.5 (northern blot)

Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
UniProt
RefSeq ID
GenBank
FBpp0075166
49.9
444
7.92
Polypeptides with Identical Sequences

There is only one protein coding transcript and one polypeptide associated with this gene

Additional Polypeptide Data and Comments
Reported size (kDa)

444 (aa); 50 (kD predicted)

Comments
External Data
Subunit Structure (UniProtKB)

Interacts with spi.

(UniProt, Q00805)
Domain

The three two-fingered repeats tightly encircle spi, providing the basis for it's sequestration. The first repeat harbors a 120 AA insert specific to drosophilidae.

(UniProt, Q00805)
Crossreferences
InterPro - A database of protein families, domains and functional sites
PDB - An information portal to biological macromolecular structures
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\aos using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-1.27

Transcript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
antennal anlage

Comment: reported as procephalic ectoderm anlage

central brain anlage

Comment: reported as procephalic ectoderm anlage

dorsal head epidermis anlage

Comment: reported as procephalic ectoderm anlage

visual anlage

Comment: reported as procephalic ectoderm anlage

antennal primordium

Comment: reported as procephalic ectoderm primordium

central brain primordium

Comment: reported as procephalic ectoderm primordium

visual primordium

Comment: reported as procephalic ectoderm primordium

dorsal head epidermis primordium

Comment: reported as procephalic ectoderm primordium

lateral head epidermis primordium

Comment: reported as procephalic ectoderm primordium

ventral head epidermis primordium

Comment: reported as procephalic ectoderm primordium

Additional Descriptive Data

Expression assayed at stages 9, 11, 13, and 17. Expression may be continuous between assayed stages in some tissues.

Expression pattern inferred from unspecified enhancer trap line.

Expression is observed in the anterior midline glial cells.

At cellularization, aos transcript is expressed in a pair of dorsal bands just anterior and posterior to the presumptive cephalic furrow, as well as in a dorsal terminal domain at bothe the anterior and posterior termini of the embryo.

aos is expressed in a complex anddynamic pattern in embryos. It is first observed in the cellularblastoderm in dorsal regions at the anterior and posterior ends and in thedorsal ectoderm anlage, in a pair-rule pattern. At stage 9, expressionoccurs in two rows of ectodermal cells bordering the mesectoderm. As themesectoderm invaginates, the rows meet and aos expression occurs in theentire ventral ectoderm. In germ band extended embryos, additionalexpression is seen in the head region and in segmentally repeated groupsof ectodermal cells. aos is expressed in dorsal and lateral epidermalcells located at the segment boundary and in all ventral epidermal cellsuntil stage 16. As the germ band retracts, aos is expressed in themidline glial cells. In third instar larvae, aos is expressed behind themorphogenetic furrow. See the associated enhancer trap pattern forEcollacZargos-W11.

The expression pattern of aos isidentical to that of the enhancer trap line EcollacZargos-A254.

Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
inferred from direct assay
Expression Deduced from Reporters
Reporter: P{lwB}aosW11
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{PZ}aos05845
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{PZ}aos05959
Stage
Tissue/Position (including subcellular localization)
Reference
Reporter: P{PZ}aosrJ472
Stage
Tissue/Position (including subcellular localization)
Reference
High-Throughput Expression Data
Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\aos in JBrowse
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 1-3
  • Stages(s) 4-6
  • Stages(s) 7-8
  • Stages(s) 9-10
  • Stages(s) 11-12
  • Stages(s) 13-16
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 47 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 50 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of aos
Transgenic constructs containing regulatory region of aos
Aberrations (Deficiencies and Duplications) ( 18 )
Variants
Variant Molecular Consequences
Alleles Representing Disease-Implicated Variants
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
adult apodeme & leg, with Scer\GAL4Dll-md23
eye photoreceptor cell & axon
glial cell & antennal disc, with Scer\GAL4hs.PB
interommatidial bristle & eye | precursor
lamina & glial cell
macrochaeta & mesothoracic tergum, with Scer\GAL4sca-C253
mesothoracic tarsal segment 1 & bract, with Scer\GAL4Dll-md23
mesothoracic tarsal segment 1 & bract, with Scer\GAL4sca-537.4
mesothoracic tarsal segment 1 & bract | dorsal, with Scer\GAL4Dll-md23
microchaeta & mesothoracic tergum, with Scer\GAL4sca-C253
retina & axon
taste bristle & leg | ectopic, with Scer\GAL4Dll-md23
taste bristle & leg | ectopic, with Scer\GAL4sca-537.4
Orthologs
Human Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Homo sapiens (Human) (0)
Model Organism Orthologs (via DIOPT v9.1)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Alignment
Complementation?
Transgene?
Rattus norvegicus (Norway rat) (0)
Mus musculus (laboratory mouse) (0)
Xenopus tropicalis (Western clawed frog) (0)
Danio rerio (Zebrafish) (0)
Caenorhabditis elegans (Nematode, roundworm) (0)
Anopheles gambiae (African malaria mosquito) (1)
1 of 12
Yes
Yes
Arabidopsis thaliana (thale-cress) (0)
Saccharomyces cerevisiae (Brewer's yeast) (0)
Schizosaccharomyces pombe (Fission yeast) (0)
Escherichia coli (enterobacterium) (0)
Other Organism Orthologs (via OrthoDB)
Data provided directly from OrthoDB:aos. Refer to their site for version information.
Paralogs
Paralogs (via DIOPT v9.1)
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    Functional Complementation Data
    Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
    Interactions
    Summary of Physical Interactions
    esyN Network Diagram
    Show neighbor-neighbor interactions:
    Show/hide secondary interactors 
    (data from AllianceMine provided by esyN)
    Select Layout:
    Legend:
    Protein
    RNA
    Selected Interactor(s)
    Other Interaction Browsers

    Please see the Physical Interaction reports below for full details
    protein-protein
    Physical Interaction
    Assay
    References
    Summary of Genetic Interactions
    esyN Network Diagram
    Show/hide secondary interactors 
    (data from AllianceMine provided by esyN)
    esyN Network Key:
    Suppression
    Enhancement
    Other Interaction Browsers

    Please look at the allele data for full details of the genetic interactions
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    suppressible
    Starting gene(s)
    Interaction type
    Interacting gene(s)
    Reference
    External Data
    Subunit Structure (UniProtKB)
    Interacts with spi.
    (UniProt, Q00805 )
    Linkouts
    BioGRID - A database of protein and genetic interactions.
    DroID - A comprehensive database of gene and protein interactions.
    MIST (genetic) - An integrated Molecular Interaction Database
    MIST (protein-protein) - An integrated Molecular Interaction Database
    Pathways
    Signaling Pathways (FlyBase)
    Negative Regulators of EGFR Signaling Pathway -
    Negative regulators of Epidermal Growth Factor Receptor signaling down-regulate the pathway, suppressing the activation of ERK kinase (rl) or acting on downstream effectors.
    Metabolic Pathways
    External Data
    Linkouts
    KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
    SignaLink - A signaling pathway resource with multi-layered regulatory networks.
    Genomic Location and Detailed Mapping Data
    Chromosome (arm)
    3L
    Recombination map
    3-44
    Cytogenetic map
    Sequence location
    FlyBase Computed Cytological Location
    Cytogenetic map
    Evidence for location
    73A2-73A2
    Limits computationally determined from genome sequence between P{lacW}l(3)j10E8j10E8&P{PZ}l(3)1053210532 and P{PZ}Baldspot02281
    Experimentally Determined Cytological Location
    Cytogenetic map
    Notes
    References
    73A1-73A2
    (determined by in situ hybridisation)
    73A-73A
    (determined by in situ hybridisation)
    73A3-73A4
    (determined by in situ hybridisation)
    Experimentally Determined Recombination Data
    Location
    Left of (cM)
    Notes
    Stocks and Reagents
    Stocks (33)
    Genomic Clones (27)
    cDNA Clones (49)
     

    Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

    cDNA clones, fully sequenced
    BDGP DGC clones
    Other clones
      Drosophila Genomics Resource Center cDNA clones

      For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

      cDNA Clones, End Sequenced (ESTs)
      RNAi and Array Information
      Linkouts
      DRSC - Results frm RNAi screens
      Antibody Information
      Laboratory Generated Antibodies
       
      Commercially Available Antibodies
       
      Developmental Studies Hybridoma Bank - Monoclonal antibodies for use in research
      Cell Line Information
      Publicly Available Cell Lines
       
        Other Stable Cell Lines
         
          Other Comments

          argos is not required for patterning of the dorsal anterior follicular epithelium.

          ChEST reveals this is a target of Mef2.

          argos mediate the number of bracts per mechanosensory bristle in the leg by lateral inhibition.

          argos exerts its inhibitory function through dual mechanisms: by blocking both the receptor dimerisation and the binding of activating ligand to the receptor.

          argos has a role in dorsal-ventral and anterior-posterior patterning in the egg.

          The extended B loop of the atypical argos EGF domain is necessary for its function.

          EGF domain swapping experiments of vn, spi and argos demonstrate that the EGF domain is the key determinant that gives Egfr inhibitors and activators their distinct properties.

          argos modifies the initial Egfr activation profile of the follicle cells, resulting in twin peaks of activity displaced from the midline.

          Shows no genetic interaction with sdk.

          In vivo culture of mutant discs from genotypes that are normally embryonic lethal demonstrates argos has no role in wing disc growth.

          argos is a negative regulator of midline glia cell survival in embryos.

          argos is a secondary target gene of Egfr, activated by pnt in response to Egfr signalling. The proper induction of argos requires the concomitant inactivation of aop, mediated by Egfr signalling.

          argos is necessary for fate determination in the ventral ectoderm. argos can be induced by Egfr activation in vivo and in Schneider cells.

          argos acts negatively to restrict the number of chordotonal (Ch) organs but not external sensory (Es) organs.

          A null mutation causes an increase in chordotonal (Ch) organs in thoracic and abdominal segments. Overexpression causes a reduction in number of Ch organs. The phenotype of a argos null mutant is not observed in a rho mutant background, indicating that rho acts epistatically to argos to regulate the correct number of Ch organs in the embryonic PNS.

          The argos gene product is a negative regulator of signal transduction that acts upstream of the Ras/MAPK cascade.

          argos is required for projection of photoreceptor axons during optic lobe development.

          Clonal analysis demonstrates argos is not required in the photoreceptor axons for correct axonal pathfinding.

          argos is required for development of embryonic PNS and for larval retinal axon guidance. The argos gene is likely to play a role in a sensory organ precursor formation process such as cell division or cell death in a cell autonomous fashion.

          The argos product plays an essential role in optic lobe development.

          argos represses the Egfr pathway in vivo and in vitro the argos protein can inhibit the activation of Egfr by spi. Thus the determination of cells by the Egfr pathway is regulated by a balance between extracellular activating and inhibiting signals.

          bul, soba and cln are candidates for argos receptor genes or may encode proteins that are involved in the elaboration or perception of the argos signal.

          argos mutants act on the development of lamina cells preventing the correct differentiation of the target region of photoreceptor axons and therefore leading to an axon guidance phenotype.

          The argos locus was identified on the basis of the rough eye phenotype of its mutants.

          Overexpression of argos causes the loss of cells in the developing eye.

          argos functions to regulate cell fate decisions as a negative signal in the developing eye and wing discs.

          argos gene product may be a new type of secreted signalling molecule involved in the process of axon pathfinding and cell determination in the visual system.

          argos may act as an inhibitory signal for cellular differentiation in the developing eye and wing.

          Clonal analysis indicates that argos acts nonautonomously.

          Phenotypic analysis of argos mutations in the developing eye suggest that argos is a diffusable negative regulator of inductive signals that specifies cell fate and can transmit a signal over a distance.

          argos has important functions in cell determination in the eye, in photoreceptor axon pathfinding and in optic lobe development.

          argos gene product is an inhibitory signal that regulates neuronal differentiation in the eye imaginal discs. argos is also required for normal development of the cephalic regions and the wings and for axonal guidance in the optic lobe.

          Relationship to Other Genes
          Source for database merge of

          Source for merge of: argos rlt

          Additional comments

          "rlt" is a regulatory allele of "argos".

          Nomenclature History
          Source for database identify of

          Source for identity of: argos rlt

          Source for identity of: aos argos

          Nomenclature comments
          Etymology
          Synonyms and Secondary IDs (19)
          Reported As
          Symbol Synonym
          aos
          (Kim et al., 2023, Muita and Baxter, 2023, Xu et al., 2023, Perlegos et al., 2022, Marmion et al., 2021, Das and Bhadra, 2020, Statzer and Ewald, 2020, Chai et al., 2019, Koca et al., 2019, Wittes and Schüpbach, 2019, Boisclair Lachance et al., 2018, Hope et al., 2018, Jia et al., 2018, Kittelmann et al., 2018, Ogura et al., 2018, Webber et al., 2018, Johnson et al., 2017, Osterfield et al., 2017, Suisse et al., 2017, Transgenic RNAi Project members, 2017-, Blick et al., 2016, Dollar et al., 2016, Jussen et al., 2016, Legent et al., 2015, Matsuda et al., 2015, Fauré et al., 2014, Valentine et al., 2014, Liu and Pfleger, 2013, Morante et al., 2013, Muñoz-Soriano et al., 2013, Sen et al., 2013, Steinhauer et al., 2013, Webber et al., 2013, Butchar et al., 2012, Foronda et al., 2012, Legent et al., 2012, Mou et al., 2012, Peng et al., 2012, Dworkin et al., 2011, Helman et al., 2011, Mirkovic et al., 2011, Murillo-Maldonado et al., 2011, Bernard et al., 2010, Rendina et al., 2010, Roignant and Treisman, 2010, Salzer et al., 2010, Debat et al., 2009, Fetting et al., 2009, Huh et al., 2009, Krejcí et al., 2009, Lachance et al., 2009, Nicholson et al., 2009, Oishi et al., 2009, Pizette et al., 2009, Terriente-Félix and de Celis, 2009, Yan et al., 2009, del Alamo and Mlodzik, 2008, McNeill et al., 2008, Miura et al., 2008, Doroquez et al., 2007, Luo et al., 2007, Montrasio et al., 2007, Muñoz-Descalzo et al., 2007, Tyler et al., 2007, Carmena et al., 2006, Dworkin and Gibson, 2006, Lam et al., 2006, Miura et al., 2006, Oishi et al., 2006, Parker, 2006, Dutta et al., 2005, Galindo et al., 2005, Iwanami et al., 2005, Stathopoulos and Levine, 2005, Wildonger et al., 2005, MacDougall et al., 2004, Wildonger et al., 2004, Alvarez et al., 2003, Chang et al., 2003, Escudero et al., 2003, Nakamura and Matsuno, 2003, Rawlins et al., 2003, Voas and Rebay, 2003, Weber et al., 2003, Carmena et al., 2002, del Alamo et al., 2002, Galindo et al., 2002, Bai et al., 2001, Chang et al., 2001, Kumar and Moses, 2001, Yang and Baker, 2001, Brennan and Moses, 2000, Carmena et al., 2000, Firth et al., 2000, Carmena et al., 1999, Chen and Chien, 1999, Daniel et al., 1999, Greaves et al., 1999, Lesokhin et al., 1999, Matakatsu et al., 1999, Shandala et al., 1999, Wessells et al., 1999, Biehs et al., 1998, Dumstrei et al., 1998, Kerber et al., 1998, Szuts et al., 1998, Buff et al., 1997, Perrimon and Perkins, 1997, Queenan et al., 1997, Simcox, 1997, Szuts et al., 1997, Yagi and Hayashi, 1997, Huang and Fischer-Vize, 1996, Wemmer and Klämbt, 1995, Freeman et al., 1991)
          l(3)05845
          l(3)05959
          l(3)j5E11
          l(3)rJ472
          l(3)rJ812
          l(3)rQ526
          Name Synonyms
          giant lens
          strawberry
          Secondary FlyBase IDs
          • FBgn0010878
          • FBgn0011388
          • FBgn0011502
          • FBgn0011505
          • FBgn0011527
          • FBgn0014382
          • FBgn0020286
          Datasets (0)
          Study focus (0)
          Experimental Role
          Project
          Project Type
          Title
          Study result (0)
          Result
          Result Type
          Title
          External Crossreferences and Linkouts ( 53 )
          Sequence Crossreferences
          NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
          GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
          GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.
          UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
          Other crossreferences
          AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.
          BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
          DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species
          EMBL-EBI Single Cell Expression Atlas - Single cell expression across species
          FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data
          FlyMine - An integrated database for Drosophila genomics
          InterPro - A database of protein families, domains and functional sites
          KEGG Genes - Molecular building blocks of life in the genomic space.
          MARRVEL_MODEL - MARRVEL (model organism gene)
          PDB - An information portal to biological macromolecular structures
          Linkouts
          BioGRID - A database of protein and genetic interactions.
          Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
          DroID - A comprehensive database of gene and protein interactions.
          DRSC - Results frm RNAi screens
          Developmental Studies Hybridoma Bank - Monoclonal antibodies for use in research
          Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
          FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
          FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
          Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
          Flygut - An atlas of the Drosophila adult midgut
          iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
          Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
          KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.
          MIST (genetic) - An integrated Molecular Interaction Database
          MIST (protein-protein) - An integrated Molecular Interaction Database
          SignaLink - A signaling pathway resource with multi-layered regulatory networks.
          References (505)