BEST:CK01140 , BP1021
Please see the JBrowse view of Dmel\PMCA for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
No completely sequenced cDNA identifed. Assignment of alternative 5' and 3' ends to a particular transcript is hypothetical.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.46
Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\PMCA using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\PMCA in JBrowse4-0
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
New annotation (CG34036) in release 4.3 of the genome annotation.
Identification: cDNA screen for secreted and transmembrane proteins expressed during embryogenesis.
Source for merge of: BEST:CK01140 BEST:CK02288 CG2165
Source for merge of: CG2165 CG34036
Annotations CG2165 and CG34036 merged as CG42314 in release 5.9 of the genome annotation.
Source for identity of: CG34036 BP1021
Source for identity of: PMCA CG42314