FB2024_03 , released June 25, 2024
Allele: Dmel\Rgk1Δ
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General Information
Symbol
Dmel\Rgk1Δ
Species
D. melanogaster
Name
FlyBase ID
FBal0326528
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Nature of the Allele
Cytology
Description

Imprecise excision of P{SUPor-P}Rgk1KG00183 results in deletion of part of Rgk1. The first exons of the RA and RC isoforms are absent and there is partial deletion of the RB isoform exon. There is a frameshift in the RB isoform at 3405 bp leading to a change of the translated peptide (QYV to HPR) followed by a stop codon, resulting in a truncated Rgk1 without the putative GTPase domain.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Comment:

A 6655 bp deletion leads to a frameshift in Rgk1-RB at aa 765 and early translation termination. The deletion removes the first exons of Rgk1-RA and Rgk1-RC.

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Rgk1Δ homozygous adults and Rgk1Δ/Df(2R)BSC26 transheterozygous adults, but not either Rgk1Δ or Df(2R)BSC26 heterozygotes, display a significant decrease in intermediate-term olfactory memory (2h after conditioning), assessed by olfactory aversive conditioning assays, which is observed regardless of the individuals being subjected to cold-shock anesthesia or not, as compared to controls; Rgk1Δ homozygous adults also display a small but significant decrease in short-term olfactory memory (5 min), as compared to controls. None of the above allelic combinations leads to defects in olfactory acuity, response to electric shocks, or morphology of the mushroom body, as compared to controls.

External Data
Interactions
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Phenotypic Class
Enhanced by
Statement
Reference
Enhancer of
Statement
Reference
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference

Adult males that are both homozygous for Rgk1Δ and hemizygous for either dnc1 or rut2080 exhibit a severe decrease in cold-shock anesthesia-resistant intermediate-term olfactory memory (3h after conditioning) as compared to adult males that are only homozygous for Rgk1Δ or, respectively, only hemizygous for dnc1 or rut2080.

Heterozygosity for Rgk1Δ enhances the intermediate-term olfactory memory (3h after conditioning) defects resulting from the adulthood-only expression of Rac1V12.Scer\UAS under the combined control of Scer\GAL4ey-OK107 and Gal80[ts].

Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Partially rescued by
Comments

The expression of Rgk1Scer\UAS.B, under the control of Scer\GAL4ey-OK107 alone, or in combination with Gal80[ts] to transiently express only for 3 days during adulthood, rescues the intermediate-term olfactory memory (2h after conditioning) defects observed in Rgk1Δ homozygous adults, and even leads to significant increases in intermediate-term memory performance as compared to controls; expression under the control of Scer\GAL4c739 alone or Scer\GAL4elav-C155 alone also partially and fully rescues, respectively, the intermediate-term olfactory memory defects of Rgk1Δ homozygous adults.

The expression of either Rgk1Scer\UAS.B.T:Avic\GFP or Rgk1ΔN.Scer\UAS.B.T:Avic\GFP, but not of either Rgk1ΔC.Scer\UAS.B.T:Avic\GFP or Rgk1S1134N.Scer\UAS.B.T:Avic\GFP, under the control of Scer\GAL4ey-OK107 rescues the intermediate-term olfactory memory defects observed in Rgk1Δ homozygous adults, and even leads to a small increase in intermediate-term memory performance, as compared to controls; the rescue by Rgk1Scer\UAS.B.T:Avic\GFP, but not by Rgk1ΔN.Scer\UAS.B.T:Avic\GFP, even occurs if the individuals are subjected to cold-shock anesthesia after conditioning.

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Mutant
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External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Rgk1Δ
Name Synonyms
Secondary FlyBase IDs
    References (2)