FB2024_03 , released June 25, 2024
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000098538
Interaction Network
Interactions Browser links
trx network
ash1 network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0110688-1.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
trx 

TRX

bait
ash1 

ASH1

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0110688-2.coIP.WB
Description
physical association
Collection
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ash1 

ASH1

bait
trx 

TRX

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was embryonic nuclear extract of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

FBrf0110688-3.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ash1 

ASH1

bait

GST tag

ash1 
trx 

TRX

prey

[35]S label

trx 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ash1 
SET domain
sufficient binding region
aa 1245-1525
trx 
SET domain
sufficient binding region
aa 3375-3759
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0110688-4.PD.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
trx 

TRX

bait

GST tag

trx 
ash1 

ASH1

prey

[35]S label

ash1 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ash1 
SET domain
sufficient binding region
aa 1245-1525
trx 
SET domain
sufficient binding region
aa 3375-3759
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced and labeled by in vitro translation.

FBrf0110688-5.coIP.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ash1 

ASH1

bait

T7 tag

ash1 
trx 

TRX

prey

[35]S label

trx 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ash1 
SET domain
sufficient binding region
aa 1245-1525
trx 
SET domain
sufficient binding region
aa 3375-3759
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro translation; prey produced and labeled by in vitro translation.

FBrf0110688-6.coIP.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
trx 

TRX

bait

T7 tag

trx 
ash1 

ASH1

prey

[35]S label

ash1 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ash1 
SET domain
sufficient binding region
aa 1245-1525
trx 
SET domain
sufficient binding region
aa 3375-3759
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced by in vitro translation; prey produced and labeled by in vitro translation.

FBrf0110688-7.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
trx 

TRX

bait

HA tag

trx 
ash1 

ASH1

prey

T7 tag

ash1 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ash1 
SET domain
sufficient binding region
aa 1245-1525
trx 
SET domain
sufficient binding region
aa 3375-3759
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of COS7 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0110688-8.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ash1 

ASH1

bait
ash1 
trx 

TRX

prey
trx 
trx 
trx 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ash1 
SET domain
sufficient binding region
aa 1245-1525
trx 
SET domain
sufficient binding region
aa 3375-3759
trx 
SET domain
mutation disrupting interaction
aa 3599-3601aa 3616-3617aa 3670-3671aa 3693aa 3697-3698

G3599V and G3601V, coordinates relative to 3726 aa isoform

E3616A and Y3617A, coordinates relative to 3726 aa isoform

P3670A and N3671Y, coordinates relative to 3726 aa isoform

I3693A, coordinates relative to 3726 aa isoform

E3697A and E3698A, coordinates relative to 3726 aa isoform

trx 
SET domain
mutation decreasing interaction
aa 3630-3635aa 3653-3654aa 3662-3663aa 3702-3703aa 3721-3722

R3630A and D3635Δ, coordinates relative to 3726 aa isoform

V3653A and D3654A, coordinates relative to 3726 aa isoform

R3662A and F3662A, coordinates relative to 3726 aa isoform

D3702A and Y3703A, coordinates relative to 3726 aa isoform

C3721A and R3722A, coordinates relative to 3726 aa isoform

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

Two-hybrid system: yeast GAL4-BD/GAL4-AD

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (1)