nocturnin, nocturin
Please see the JBrowse view of Dmel\cu for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Low-frequency RNA-Seq exon junction(s) not annotated.
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Gene model reviewed during 5.47
None of the polypeptides share 100% sequence identity.
Associates to the CCR4-NOT complex composed of at least Pop2/Caf1-55, Ccr4, Not1, Rga/Not2, and Not3.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\cu using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: posterior to the later imaginal ring region
Comment: expression specific to cu isoforms cu-RC, RD and RE.
cu transcripts are detected at all stages by northern blot. Strong expression is observed in embryos in the proventricus, ring gland, and salivary glands and weak expression is seen in the midgut by in situ hybridization. Proventricular and ring gland expression is also observed in third instar larvae.
Comment: expression specific to cu isoform cu-PD.
JBrowse - Visual display of RNA-Seq signals
View Dmel\cu in JBrowsePlease Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for merge of: cu nocturnin
Source for merge of: nocturin CG4782
Annotations CG4782 and CG4796 merged as CG31299 in release 3 of the genome annotation.
Source for identity of CG4796 nocturin was sequence comparison ( date:020814 ).
Source for identity of: CG4796 nocturin