Please see the JBrowse view of Dmel\Rsph4a for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.52
There is only one protein coding transcript and one polypeptide associated with this gene
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Rsph4a using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: data from FlyAtlas
As part of a survey of ciliary motility gene homologs in Drosophila, expression of Rsph4a was assayed in motile ciliated cell types. Expression was observed in sperm (testis) but not chordotonal neurons.
JBrowse - Visual display of RNA-Seq signals
View Dmel\Rsph4a in JBrowse2-106
2-109.9
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
Source for merge of: CG3121 anon-WO0140519.109
Source for merge of CG3121 anon-WO0140519.109 was sequence comparison ( date:051113 ).
Source for identity of: Rsph4a CG3121
Named 'Rsph4a' based on the human ortholog.