FB2024_03 , released June 25, 2024
Human Disease Model Report: neuronal ceroid lipofuscinosis 1
Open Close
General Information
Name
neuronal ceroid lipofuscinosis 1
FlyBase ID
FBhh0000104
Overview

This report describes neuronal ceroid lipofuscinosis 1 (CLN1), which is a subtype of neuronal ceroid lipofuscinosis; CLN1 exhibits autosomal recessive inheritance. The human gene implicated in this disease is palmitoyl-protein thioesterase 1 (PPT1), which removes long-chain fatty acids from proteins during lysosomal degradation. There is a single fly ortholog, Dmel\Ppt1, for which classical loss-of-function alleles and RNAi-targeting constructs have been generated.

The human PPT1 gene has not been introduced into flies.

Loss-of-function mutations of Dmel\Ppt1 exhibit a reduced lifespan, locomotor defects and neuroanatomy defects. Genetic and physical interactions of Dmel\Ppt1 have been described; see below and in the Ppt1 gene report.

[updated Apr. 2017 by FlyBase; FBrf0222196]

Disease Summary Information
Parent Disease Summary: neuronal ceroid lipofuscinosis
Symptoms and phenotype

The neuronal ceroid lipofuscinoses (NCLs or CLNs) are a clinically heterogeneous group of neurodegenerative disorders; the general clinical course includes progressive dementia, seizures, and progressive visual failure (Mole et al., 2005; pubmed:15965709). [from MIM:256730; 2016.01.05]

Individuals with all forms NCL have shortened life expectancy, but it is highly variable, depending upon the form of the disease (from Medscape, http://emedicine.medscape.com/article/1178391-overview; 2016.01.05).

The term Batten disease may refer specifically to the juvenile-onset form, but is also used to refer to any NCL.

Specific Disease Summary: neuronal ceroid lipofuscinosis 1
OMIM report

[CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1](https://omim.org/entry/256730)

Human gene(s) implicated

[PALMITOYL-PROTEIN THIOESTERASE 1; PPT1](https://omim.org/entry/600722)

Symptoms and phenotype

See general description of neuronal ceroid lipofuscinosis, above. Neuronal ceroid lipofuscinosis 1 (CLN1) is most commonly an infantile-onset form of the disease, but some variants show juvenile- or adult-onset. [from MIM:256730; 2016.01.05]

Genetics

CLN1 is typically inherited as an autosomal recessive and is caused by homozygous or compound heterozygous mutation in the gene encoding palmitoyl-protein thioesterase-1 (PPT1). [from MIM:256730; 2016.01.05]

Cellular phenotype and pathology
Molecular information

PPT1 removes thioester-linked fatty acyl groups such as palmitate from modified cysteine residues in proteins or peptides during lysosomal degradation (UniProt:P50897; 2016.01.05).

Palmitoyl-protein thioesterase 1 (PPT1) is a small glycoprotein that removes palmitate groups from cysteine residues in lipid-modified proteins. [from MIM:600722; 2016.01.05]

External links
Disease synonyms
ceroid lipofuscinosis, neuronal
ceroid lipofuscinosis, neuronal, 1
ceroid lipofuscinosis, neuronal, 1, variable age at onset
CLN1
INCL
NCL1
neuronal ceroid lipofuscinosis
neuronal ceroid lipofuscinosis, infantile
Santavuori disease
Search term: lipid storage disease
Search term: lysosomal storage disorder
Ortholog Information
Human gene(s) in FlyBase
    Human gene (HGNC)
    D. melanogaster ortholog (based on DIOPT)
    Comments on ortholog(s)

    One to one: 1 human to 1 Drosophila (reciprocal best hit).

    Other mammalian ortholog(s) used
      D. melanogaster Gene Information (1)
      Gene Snapshot
      Palmitoyl-protein thioesterase 1 (Ppt1) encodes a lysosomal enzyme that removes palmitoyl groups from particular target proteins during protein degradation within the lysosomal compartment. Palmitoylation is critical for the cellular localization and modulation of many signaling proteins. [Date last reviewed: 2019-03-14]
      Cellular component (GO)
      Gene Groups / Pathways
      Comments on ortholog(s)

      High-scoring ortholog of human PPT1 (1 Drosophila to 1 human). Dmel\Ppt1 shares 55% identity and 72% similarity with human PPT1.

      Orthologs and Alignments from DRSC
      DIOPT - DRSC Integrative Ortholog Prediction Tool - Click the link below to search for orthologs in Humans
      Other Genes Used: Viral, Bacterial, Synthetic (0)
        Summary of Physical Interactions (3 groups)
        protein-protein
        Interacting group
        Assay
        References
        experimental knowledge based
        experimental knowledge based
        anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based
        Alleles Reported to Model Human Disease (Disease Ontology) (5 alleles)
        Alleles Representing Disease-Implicated Variants
        Genetic Tools, Stocks and Reagents
        Sources of Stocks
        Contact lab of origin for a reagent not available from a public stock center.
        Bloomington Stock Center Disease Page
        Related mammalian, viral, bacterial, or synthetic transgenes
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila transgenes
        Allele
        Transgene
        Publicly Available Stocks
        RNAi constructs available
        Allele
        Transgene
        Publicly Available Stocks
        Selected Drosophila classical alleles
        Allele
        Allele class
        Mutagen
        Publicly Available Stocks
        amorphic allele - genetic evidence
        ethyl methanesulfonate
        amorphic allele - genetic evidence
        ethyl methanesulfonate
        References (10)