FB2024_03 , released June 25, 2024
Aberration: Dmel\Df(3L)st-e4
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General Information
Symbol
Df(3L)st-e4
Species
D. melanogaster
Name
Deficiency (3L) scarlet
FlyBase ID
FBab0002410
Feature type
chromosomal_deletion
Computed Breakpoints include

72D5;73A5

Features within 72D5--73A5
Sequence coordinates
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
X ray
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Belote et al., 1990, Tearle et al., 1989)
Breakpoints

72D5-72D10;73A5

(Tearle et al., 1989)

72D5-72D10;73A5-73A8

(Belote et al., 1990)
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data

th << bk1 << l(3)72Dm << st << bk2 << l(3)73Ah

Genetic mapping information
Comments

+60. DNA coordinates (kb) of proximal breakpoints in the walk in region 73A-B of McKeown and Belote, which originates at the left breakpoint of In(3LR)sta27 ('+' values to right, '-' values to left). Df(3L)st-E coordinates from Butler et al., 1986; coordinate 0 halfway between right breakpoints of Df(3L)st-E5 and Df(3L)st-E52; positive values to the left

Comments on Cytology

Left limit of break 1 from polytene analysis (citation unavailable) Right limit of break 1 from inclusion of Taf4 (FBrf0091161) Limits of break 2 from polytene analysis (FBrf0049915)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Genes NOT Deleted / Disrupted
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (0)
    If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
    In this case, the "Export to Hitlist" button at left will also be disabled.
    Phenotypic Data
    In combination with other aberrations
    NOT in combination with other aberrations

    Heterozygosity for Df(3L)st-e4 results in 1.1% X chromosome nondisjunction and 0.7% fourth chromosome nondisjunction in In(1)FM7/X ; svspa-pol females.

    (Harris et al., 2003)
    Stocks (2)
    Notes on Origin
    Discoverer

    Belote and McKeown.

    (Belote et al., 1990)

    Belote.

     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
     
    Other Comments
     
    Synonyms and Secondary IDs (4)
    Reported As
    Symbol Synonym
    Df(3L)st-e4
    (Huang et al., 2022, Cooper and Kennison, 2011, Raymond et al., 2004)
    Df(3L)ste4
    (Harris et al., 2003)
    Df(3L)ste4
    (McKeown et al., 1987)
    Name Synonyms
    Deficiency (3L) scarlet
    Secondary FlyBase IDs
      References (15)