FlyBase Insertion Report: Dmel\PBac{544.SVS-1}pip[CPTI002126]

General Information

Symbol

Dmel\PBac{544.SVS-1}pip^CPTI002126

Species

D. melanogaster

Name

FlyBase ID

FBti0143833

Feature type

transposable_element_insertion_site

Description

Inserted Element

PBac{544.SVS-1}

LINE ID

Affected gene(s)

Avic\GFP, pip

Viability / fertility

Associated allele(s)

Avic\GFP^{pip-CPTI002126}, pip^CPTI002126

Stock availability

1 publicly available

Genomic Location

Chromosomal Location

3L ( 76A6 )

Sequence Location

3L:19,314,358..19,314,358

Target / Docking site

Genomic Maps

JBrowse

Member of Large Scale Dataset(s)

Dataset

TI_set_PBac{SVS-0,1,2}.CPTI

Description

A set of transgenic insertion stocks derived by TE mobilization using one of the Tni\piggyBac-based protein-trap constructs PBac{544.SVS-1}, PBac{768.FSVS-0}, PBac{769.FSVS-1}, or PBac{806.LOX-SVS-2}. The constructs carry a w^+mC mini-white visible marker and a Strep-tagged Avic\GFP vital fluorescent protein-trap marker (using the Venus YFP variant of GFP). The frame used for the splice acceptor and splice donor consensus sequences relative to the Avic\GFP sequence is indicated by 0, 1, or 2 in the construct symbol.

(FlyProt project., 2009.11)

Detailed Mapping Data

Chromosome (arm)

Sequence Location

3L:19,314,358..19,314,358

(FlyProt project., 2011.8.8)

Orientation

Cytological location (computed by FlyBase)

76A6 (inferred by FlyBase from sequence location)

Cytological location (reported)

Insertion into Natural transposon

Comments concerning location