From: FlyBase-error@XXXX
Date: Tue, 17 Sep 2002  02:35:32  \-0700
To: flybase-updates@XXXX
Cc: martina.schneider@XXXX
Subject: FlyBase error report for CG18250 on Tue Sep 17  02:35:32  2002
Error report from Martina Schneider (martina.schneider@XXXX)
Gene or accession: CG18250
Release: 1
Gene annotation error
Gene CG18250 has incorrect exon/intron structure or translation start site.
Comments: The new release lacks an exon between exon 7 and 8. This exon
(further referred to as exon 8) had been included in the previous release (see
bottom).
We sequenced LD11619 and find exon 8 to be present.
We further checked several cDNAs for the presence of exon 8 and the following
exon, 9, and found that both are subjected to alternative splicing.
LD11619 includes 8 and lacks exon 9.
SD06707 lacks both, exon 8 and 9.
GH09323 lacks exon 8 and includes exon 9.
> CG18250:8  generated Thu Dec 20  06:06:29  2001
TTGGAGGTGTCGGAGAAGATAGTGTCGCCCGAATCCGTCTCTTCGTCGGC
TGTTCCCCTGGTTCCGGACGTGGAGGAGGAGATCGAAGAGAGCGTCTCCA
AGCTGGAGTCCGTCATCAGCAAGACGATTGAGAATACGAAGAATATTAAG
GAGCTGCCCGTTCTGGGCGAAGCCGACGATGGTGAAGATGAAGAGGAAGT
GGAACTACAGCAATTGGGAGTTCCATTGGCCGCGGAGATTGTGCCAGACG
AAACCACCAGTGCGGCGGCCACACGTGCCACGGAAATGGTAAAGCCCGTT
GATTTGGATGAGCAAGAAATTTCGGTGGACTCCGGCGCTGTGCCGGCTAT
CGATGTGGAGGCCTCGGCCACGCCCACGCCCTCGATGTCCGCTCGCGAAA
CACAGAAGCCCTTTTCACCCTATGACGCCACCTCTTCGGTGTCGTCCTCG
TTCTCGCCCGTCGCATCGATTGCATCTGGCAGCGAAGCTGGTGAAGATTC
AACTTCGGTGTCGACCCCTCACCTGTCCCCAGCTAACTCACCCACGGTCA
TGCCCACAGAGCTAGACAGAAATGGCCTAGCCACCACATCATCCTCATCA
TCTTCATCCGCCTCACCTCCTCCATCGTCATCCGTTCCAACACAAGCCAC
TCAACCAACCACATCTGCATCATCATTCTCATCATCATCATCAACAACAA
CAACAAGCACAACAGCAACAGTCTCAACAACAACAACAGCATCATCAACA
GCAACAACAACTACAACAACAACAACACTGTCTGAATCGCCAAAG