Please see the JBrowse view of Dmel\loopin-1 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.50
The group(s) of polypeptides indicated below share identical sequence to each other.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\loopin-1 using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
loopin-1 is deteceted in the adult male testis but not in the rest of the carcass by RT-PCR.
loopin-1 is detected in sperm by 2D-Gels and by mass spectrometry.
JBrowse - Visual display of RNA-Seq signals
View Dmel\loopin-1 in JBrowsePlease Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Isolated by screening a testis-specific cDNA expression library with polyclonal serum T53-1, which decorates the kl-3 Y-chromosome loop.
Source for merge of: CG4750 kl3lp1
Source for merge of: CG4750 anon-WO0140519.81
Source for merge of CG4750 anon-WO0140519.81 was sequence comparison ( date:051113 ).
Source for identity of: loopin-1 CG4750 kl3lp1