Please see the JBrowse view of Dmel\Clbn for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.49
Gene model reviewed during 5.55
Component of the ribosome quality control complex (RQC), composed of at least the E3 ubiquitin ligase l(3)76BDr/LTN1 and Clbn/NEMF associated with the 60S ribosomal subunit. The complex probably also contains TCF25 as well as TER94/VCP and its ubiquitin-binding cofactors (By similarity). Interacts (via its C-terminus) with pros (via its homeobox) (PubMed:16103875). Interacts (via its N-terminus) with emb (PubMed:16103875).
The N-terminal domain contains a nuclear export signal. The C-terminal domain may interact with cargo proteins.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Clbn using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\Clbn in JBrowse3-87
3-85.6
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
Source for merge of: Clbn CG11847