BcDNA:SD05564
Please see the JBrowse view of Dmel\PH4αEFB for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.44
There is only one protein coding transcript and one polypeptide associated with this gene
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\PH4αEFB using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Comment: reported as plasmatocytes anlage
JBrowse - Visual display of RNA-Seq signals
View Dmel\PH4αEFB in JBrowse3-100
3-98.4
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Source for merge of: PH4αEFB BcDNA:SD05564
Source for merge of: CG12088 CG1473
Source for merge of: CG1473 CG12088
Annotations CG12088, CG1473 merged as CG31022 in release 3 of the genome annotation.
Source for merge of CG1473 CG12088 was a shared cDNA ( date:010720 ).
Source for merge of PH4αEFB BcDNA:SD05564 was a shared cDNA ( date:020730 ).
Source for identity of PH4αEFB CG1473 was sequence comparison ( date:020425 ).
Source for identity of: PH4αEFB CG1473