dTG
Please see the JBrowse view of Dmel\Tg for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.46
Evidence supports alternative transcription start site within intronic TE (RAMPAGE TSS data, FBrf0220331; RNA-Seq data). May be specific to sequenced strain; not included in gene model.
None of the polypeptides share 100% sequence identity.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Tg using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Tg transcripts are first detected in embryos at stage 14 ventral to the pharynx. In stage 15 they are observed in the precursors to the cardiac outflow region as well as at low levels in seven bilateral pairs of cells referred to as the cardiac Svp cells. By stage 16, strong expression is observed in the cardiac outflow tract, in the seven sets of Svp cells of the dorsal vessel, and in cardial cells in the heart. Transcripts originating from the Tg downstream promoter predominate at the embryonic stage.
JBrowse - Visual display of RNA-Seq signals
View Dmel\Tg in JBrowse2-29
2-26.4
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
polyclonal
monoclonal
FlyBase curator comment: Correspondence with author Theopold revealed that 'Transglutaminase' is encoded by 'CG7356'.
Source for identity of: Tg CG7356