Gart, Pcpgart
Please see the JBrowse view of Dmel\Pcp for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.49
0.9 (northern blot)
There is only one protein coding transcript and one polypeptide associated with this gene
184 (aa)
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Pcp using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
Pcp transcript is detected at high levels in prepupae. In sections of whole prepupae, the transcript hybridizes over a 3 hr developmental period to abdominal epidermal cells that secrete the pupal cuticle.
JBrowse - Visual display of RNA-Seq signals
View Dmel\Pcp in JBrowse2-24
2-23.2
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Ecdysteroid-regulated gene.
Apparently encodes pupal cuticle protein since in 11 hr prepupae, the Pcp mRNA is found primarily in the abdomen in epidermis involved in cuticle formation. The pupal cuticle protein itself has not been identified.
Source for identity of: Pcp CG3440