FB2024_03 , released June 25, 2024
Allele: Dmel\ninaB1
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General Information
Symbol
Dmel\ninaB1
Species
D. melanogaster
Name
FlyBase ID
FBal0012988
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
ninaBP315
Key Links
Genomic Maps

Allele class
Nature of the Allele
Allele class
Progenitor genotype
Cytology
Description

Amino acid replacement: E280K. Nucleotide substitution: G838A. Amino acid replacement: M471L. Nucleotide substitution: A1411C. Amino acid replacement: E477A. Nucleotide substitution: A1430C.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Nucleotide change:

G13701918A

Reported nucleotide change:

G838A

Amino acid change:

E280K | ninaB-PA

Reported amino acid change:

E280K

Comment:

One of 3 amino acid substitutions in this strain

Nucleotide change:

A13702491C

Reported nucleotide change:

A1411C

Amino acid change:

M471L | ninaB-PA

Reported amino acid change:

M471L

Comment:

One of 3 amino acid substitutions in this strain

Nucleotide change:

A13702510C

Reported nucleotide change:

A1430C

Amino acid change:

E477A | ninaB-PA

Reported amino acid change:

E477A

Comment:

One of 3 amino acid substitutions in this strain

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

ninaB1 mutants are slow to mate (i.e. increased copulation latency), compared to controls. Unlike controls, ninaB1 mutants do not decrease copulation latency in the presence of parasitic wasps Leptopilina heterotoma and Leptopilina boulardi.

Homozygous flies lack the prolonged depolarising afterpotential (PDA) in the electroretinogram response. In mosaic flies in which the retinal tissue is homozygous for ninaB1 but the rest of the animal is ninaB+, the electroretinogram response is normal (the PDA is restored).

The deep pseudopupil is not visible in homozygous mutant adults, only a weak shadow is detected in the eye. This phenotype can be rescued by supplementing the flies' diet with all-trans retinal.

Superficially like ninaA in aberrant visual physiology, but all eight photoreceptors in each eye facet affected by ninaB; can be restored to wild-type phenotype by dietary supplement of retinal but not by other retinoids.

External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Images (0)
Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer
Comments
Comments

Experiments in recombinant E.coli suggest that it is the G838A substitution that causes the defect.

External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (2)
Reported As
Name Synonyms
Secondary FlyBase IDs
    References (6)