FB2024_03 , released June 25, 2024
Aberration: Dmel\Df(3R)BSC24
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General Information
Symbol
Df(3R)BSC24
Species
D. melanogaster
Name
FlyBase ID
FBab0029839
Feature type
chromosomal_deletion
Computed Breakpoints include
Features within 85B7--85D15 (Estimated cytology)
Genomic Maps
Sequence coordinates
3R:8,931,170..8,937,935 (Df(3R)BSC24:bk1)
(Cook et al., 2010.2.12)
3R:9,394,495..9,401,044 (Df(3R)BSC24:bk2)
(Cook et al., 2010.2.12)
Member of large scale dataset(s)
Dfs_BSC_set1

A set of ~50 targeted deficiencies created by exploiting hybrid element insertion (HEI) and resolution; designed to fill gaps in deletion coverage.

(Parks et al., 2004)
Nature of Aberration
Cytological Order
Progenitor
P{EP}EP3243
(Parks et al., 2004, Deal-Herr and Cook, 2002.11.8)
P{EP}EP707EP707
(Parks et al., 2004, Deal-Herr and Cook, 2002.11.8)
Mutagen
Delta2-3 transposase
(Deal-Herr and Cook, 2002.11.8)
recombination
(Deal-Herr and Cook, 2002.11.8)
Class of aberration (relative to wild type)
chromosomal_deletion
(Cook et al., 2010.2.12, FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Parks et al., 2004, Deal-Herr and Cook, 2002.11.8)
Breakpoints

85C4-85C9;85D12-85D14

(Parks et al., 2004, Deal-Herr and Cook, 2002.11.8)
Causes alleles
Carries alleles
ca1
(Deal-Herr and Cook, 2002.11.8)
st1
(Deal-Herr and Cook, 2002.11.8)
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments
Comments on Cytology

The left Df(3R)BSC24 breakpoint lies within pyd or osk or in the region between them, and lies in the range 3R:4756892..4763657 (R5) (predicted cytology: 85B7).

(Cook et al., 2010.2.12)

The right Df(3R)BSC24 breakpoint lies within Fps85D or RpL34b or in the region between them, and lies in the range 3R:5220217..5226766 (R5) (predicted cytology: 85D15).

(Cook et al., 2010.2.12)
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
E(var)3-9
(Weiler, 2007)
neur
(Deal-Herr and Cook, 2002.11.8)
osk
(Deal-Herr and Cook, 2002.11.8)
pum
(Deal-Herr and Cook, 2002.11.8)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

The salivary gland distal tip does not initiate turning and migration in embryos homozygous for Df(3R)BSC24 by stage 14.

(Jattani et al., 2009)
Stocks (2)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

The deficiency chromosome retains the miniwhite marker from one or both P{EP}EP1090 elements.

(Deal-Herr and Cook, 2002.11.8)
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
Df pumBSC24
(Wharton et al., 2018)
Df(3R)BSC24
(Galindo et al., 2014, Cook et al., 2010.2.12, Jattani et al., 2009, Weiler and Chatterjee, 2009, Weiler, 2007, Menon et al., 2004)
Name Synonyms
Secondary FlyBase IDs
    References (15)