FB2024_03 , released June 25, 2024
Transcript: Dmel\Pif1A-RJ
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General Information
Symbol
Dmel\Pif1A-RJ
Species
D. melanogaster
Annotation Symbol
CG42599-RJ
FlyBase ID
FBtr0433507
Feature type
Associated gene
Evidence Rank
Length (nt)
7780
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 63 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
    cDNA Clones, End Sequence Only (ESTs)
    End(s) extend beyond the annotated transcript, internally consistent
    Sequence
    CAGTTTGTTCCTACCGCTCAACTTGAGTGAGTTGTGCACCGAGCAGCAATTAAATGAAAAATAGAAGAGTCATTTGAAAG
    GCCAAAACGCCAGAACATTCAACCGCAAATAGGTTTAAATGAAAGAAAGCATTCTAAATCTAATTCGGTCATGTGGAATT
    GGAATTTTAGTTGCCCAAGACTCCTCTTAACGACGACATCGAACCACAAGGGATGCCAATGGATACTAACCGGATACTAG
    ACAATTGCCGAGTGATTATGAAACAAATCAGGATGCTGAACCGACTATGAAAAATGCAAATAATTTCCCCTGTGTTGACT
    GACTGGAATCGGAATGTGTTCTAATTGTGTCCATCATTCATCGCGTCGTTAAGGCGATTGTCAAATTTATTGAGGAGAAT
    CCAACGATGACCAGGTGAAGTATAGCAGGGACTTTCGGCAGGATCGGGGTGCACCGGCATATGCAGTACTTGAAAAAGCA
    GAAACCCAAAAAAAAACGACGGCAACATTTTTATATACTAAAGTTACATAAAAATGGCTGAAAACCAAACCAAAACGACC
    TCTAGCAAGGGATGTAATACAATGAGCAGGACCGCCCATATCCTGGCGCCCCACAATGGGACTGTGGTCCGCCGGACGGA
    TCCTGGCTCCAAACTCAAAGAGAGCTTCCACACGGAGAAGCACGATATCGAAGACTGGCAAACGATGGCCAAGAACAAGT
    TGAAGCGCAAGAAGAAACTGAGCAGCTCCCTGACTTCCGTTGGGGATACGGTGAATCAGGAGAAGCGCACTCGCATCGAG
    GGCATCCAGCTGCATTGTCGCGGCAAATTGCGACCCAAGGAGACCCAATCCTTTGAGGCCGAGAAGGGCCCATCTGCCGG
    CTCCCAGAAGCAACTGGGAAAGGCAGAAAAAGATCGAGAACGACCCGTAATAATTGGTGGCGTGACTACCACAAATGTGA
    TAGCAGCACCTCCACAAAGGATCAAGAGAAAACTGCAGGAGAACATGGACACCATCCAGAAGCTAAATGCCCTCACGGAG
    CAACTGCGTCTGGAGGTAAATGAACTGAAGTCCAGTCTGATCACAGAACGCGGTGCAGTGAGAGCCTTAAGGGCTCAGAA
    TGACGCAGATAGTCGTCGGTGGAAGAGTGAAGTGAAGAAGTTGCAGCATACGCTGGAAATGGCCAAGAAGAGCAACGGTA
    TAAAGAAGGCCATCGAATCGGGCCCAGAATCGAGTGGTGCACATGTGACCGCCGATGGCCTCATCAACTATGAAATCCAA
    AGACTGACTAACGAGATTGCCGTGCTGAAGGAAGCGAATCGAAACAAGGAGGAGAAGACCCAGATTATGGGGCAGGCTGA
    TAGACTCAAGGCTGCCGATATGCGGCAATTGAAGAACGCGTACGAAAACCGATTGACTCACATACAGAAATCAGCCAAAA
    TTGAAATAACACGTTTGTTAGAGGAAATAAAGACCAAAGAACGTAATATAGGACAACTGAGGAAGGACTTGCTGGCACTG
    CAGAGTCCCAAGAAGCTGAAGCAGAATGAAGCCAAAGTGCCAGCGACGACGAAACCCAAAACGAACCCCAACGAAACGAG
    CCAAAAGCCAAAGAAACCCACTACGAAGGCGGCGGGAGAAACAAAAGCTAAAACCGAACCAGATACAGATACAGATATAT
    CCGAGCAAAATCCCATACGCCAGGCTCAAGTTACACCTGAGATAACCCAACTCAAGAACATTGAGCTAATCAACAATACG
    AAAAATGCACATAAATCAGCGCTCGAGATGCGCACAACAATGAAGAGCAGTCAGCCGAATGGATTGGATGATGCTCCTAC
    ACGGATGAGGGCCCCCGACGAGATGAGGGCCACCACTTGGATGACGACGCTGGTAGGCAGTAACTGCCATAGCCACAGCC
    ACAGCCATCCGGCAGTAGCCAAGTCGAAGGATCCCAATTCGGACACGGACTCGGCCTTGTCCTCGGCCCCGCCCTCCATC
    AGCCCGCAGCCGCCATCCAGCGGATCCGACAGCGGCGTGATTTGGCAAACACTGCAGGACCTGGACAAGTTGCAAAAGGA
    AGCGGAAATGTACCAAAAGGAGAACGAACGCCTGCAGACGGAGGTGCAGCTGATGAAACAGGAGCTGGATGCCGCGGAAA
    AGGCGGCCATAAGCAGGGCCAAGAAGCAGGCCCAGATCGGGGAGCTGATGCAGCGCATCAAGGAGCTGGAAGAGATGCAG
    TCGAGCTTGGAGGACGAGGCCAGCGAACTGAGGGAGCAGAATGAACTCCTTGAGTTTCGCATACTCGAGCTGGAAGATGA
    TAGCGATAAGATGGAGAGCACCTGCGAGGGCCACTGCCAGAGTCTGCAGGATCTGCTGGAGCAGTCTGCCCAGCGGCTGG
    AGGATCGGGACAAGCGCTGCTTGCAACAATTGCTGCAGTGCGTCCAGCAACTGGATCTGGATACCATGATGCCAGGCGAT
    CAGAACCGGACGGAAACTCCCAAAAGGCACAATTCAACCCACAGTCACAGTCACAGTCACAGCCACAGTCAAAGTCACAA
    CCACAGGATCGTAGCCACAGTTCAGCCGTATAGCAACTGTGCCACGCCCACAGCCCCGCCCACGCCAAGCAAGAGGCACT
    GCAACCAGGTGAGCTCGTGGCAGAGCAGCAGCCTCAGCGAGAGCGGAGTGTTCGTAGAGTGCGATCTGCTTTCGAATCCC
    AATCCCATTGGCCACCCGCATCTGCAGTTCTATCAGGAGAGATTGGAGCAGTTGGAGGGCAAGCTGCTGATCTACGAGAG
    CAGCGGCGAGACCCAGGCACGGCACTTGGCCCAGAGACTGCAGCGGGAACTGCAGCTGGAGAAGGATCTCAAAGAGCTTG
    CGGACCGAGTGGAATTGCTAATCGAGCAAAACGCCCAGTTGGAGGAGGCCAAGTGCGAGTTTGAGGAGGCCGAGAACGAT
    ACACGACTCCATTTGCAGCGTAACGAGGTGGAACTTGAAATTCTTCGCCAGCGCAACGTGGAGTTGGAATTCGGCAAGGA
    AGCACTAGGCGCCAAGTATCAGGATTGCAGGGCGGAGGTACTAATCCTTCGAGAGGATCTAGCGGCAGCTGAAACCCAAC
    TGGAGCATCTGCAGGCCGAAAGGAAGCAAGCCAGAAAGGAGCTTCAGGATCTGAGAAGATCGCTTCCATTACTCCTAATC
    TTCCGCTTGTTATCACTAGCCAAAATGGGCAACGAGGAATCCTCCCCGGGAGGCAGCCCCCGCCTCTCCTCGGGCTACAC
    TTCTTCTATACACCAGGATCGAGATTTCAGTGCCAAGATCCAAACAACGGAGTTTGACCTCGGTCAAGCGGGATTTACCG
    ATTCCGGCGAGGAACGGGAGATCGTTTACCTAAAGGAAGAGGTCAAGAGTCTGCGTAGCCAACTGAAAGAGCTAAATGCC
    CGGCACTACGAAGCCATGGAAACAGCAGACTCACACTGGGTAGATCTGGAGCAGCAGTACAAGGAGCGCGAGGAGGCCCA
    ACAGGCCAAGGAGGCCAGTCTCAAGCAGAAGATAGCCCAACTGCAAGATTGCCTCCGGGAGGATTCCCGAGCGGCGACCG
    AAAAGATCCAGCAGCTGGAGGAGGGGGAACTGTCATTGAAGTCCTGCCTGGTCCGCATGACCAAGGAGCATCGCGACCTG
    CTCACCGAGAATCGCACTCTGCAGTGCAGCTTGGAGAGTCTAATGGCCAAAATGGAAAAGGAGGCGGAACACAAGATGCC
    CCTAACAGAGGCTCTAGAAAACGAGAGGCGCAAAACCCAGGCACTGATGGATGACCTTATCTTTGCCAAGAAGGTGCAGC
    AGAACACCGAGGATCAGTTGAGGCAGGAGACGGATGCTTTGCGCACCCAGATCTTCAACATCAAAAAGGATTACCTGCAC
    ATCGAGGTCACAAATGGCGAGCTGAAAGAGGAGGTGGGCACGCTGGAGAACAAAATCCGCCAGATGGAGAACCAAATGAG
    GGATTCGGAGGAGCGGGCGCGCTGCCTGGAGGACGAGCTGCGAACCAAGGACGAACAATGCCAGCTCTTGGAACGCAAAC
    TGGGCGTTATGCCCGAGGGCTACAGCCTGGCCGATGAACTCCATGATAGTCCTGCGAAGCGGGCCAAGAAGGATGAGGTA
    CCGAGCCTCCAGGCTGCCAGCCAGGGACTGGGCGTGGCCCTACTCGATCTCGAGGGTCGTGATTTTGGTCTACCACTGCA
    CAAGGACTTCCAAGCAATTGCCTGCAGTGTAAAGCAACTGGCGGATACCCTTCTCTCACAGAGTCCGTCCGAGAATGCCC
    GGCTCTGATGTACATGCAGCATGAGCGACATTCCGACAGCGACCCCAACTCCCGCCATCAACAAACCGAGGCATCCCACA
    TGAGAGACCACTGGAAGCCGTCAAAATCCCAACAGTCGCAACAATCTGATCGTGTAGACCCTCATGACAAGCCATCGCAG
    ACGGCGGTCTCCTTTCTGCAGAAACACCACACGCCTAAGAACCCGGAATCGAAGGCTAATCCAGATGATGGGGCGTCCTG
    CTCATGCACCGCAAAGAGGTCCAAGTCCGCCGATCCACCAGCGGTTAAAGCTCACACCTGTGCATGCAACACCGATCCAA
    GTCCATGTGGACTGGGTCATCAGGAGAAATCCAGTTCGAGGAAGCCCTGCTCCCAGAAAACATCGGTTACGGAACCAGAG
    AAGGCTTCCTCATTCAAGAGTGCTATAACAGCGTGTACCAAGGAGCTCCTCGATCCCTGCACTTGTGGCGCCCACCCACC
    ATACTGGGCTGGTCAAAGCAACTTGGTAACCGGACCATCCTACAGTAGAGCAATGGACCCCTCCTCAAGCACTCTCGCTC
    CCTTGCATAGACCCGGAGCATCAAAAGGCAGCTTTGGTCGATCCAAGAGTTTGGCCAGTCTGCCTAGTAAATCTAATCCG
    CCAACTCAGAGTGGCGTCACTTGGTTGTCGGCTTTAAAGGATCCGGAGAGTACATGTTGCTCTTCCAAAGAGGACGAACG
    TCCTGCATGTACCTGCAACGCTACCCAGACTAATCAGGATCCTTCTATGAGTTCACTTCCTCAGAGCCATCCCAATTATC
    GCAGTATGACATCCAAATCAAGTAATTTCAGGGCGCCAAACCCGCGCAATCAACCCTCCTTTGGGCCAGGCGATGAGACC
    TCAGCAACCACACGATCCCAATCGATTGTGGGTCAGGTCACCTGCCTATGCGCATCGGAGCATCAACCCACCAAGGCCTT
    TGTGTCGAGCCTGGCCGATCGGGAATGCCCAAATGAGATCCAGATTGCGCCATGCCCCTCCACAAGAATACACCATCCAT
    CCGGGTTTGCCCAGTTCACCGATTGTCAGAACTCTCAAGGCGACCCCAGTACCTCTTTCCGTTCTAGGAAAGTGAGCGTT
    AAGGGTCAGGAGGAATTTTGTGACTGTGATGCTTCTGATAACTTCTCCGAACTGTCCGATCCCATCCAGACCAGTCTTCA
    TACGCACAGGAGTCTTTCCGGGGGTAGTTGCCTGTGCAACGACGATGCAGATCCTCCGAAGGAACCCGAAAAGGCTACGT
    GTGTCAGCAAGCAGTGCCAGTGCTCTTCGAATGACGAGCTTCAGGGGATGCAAAGTGCCCAAGCGGGTACCGGCTATCAG
    ACACCAGAGGATCTTTGTGGAAATAGGGCTATGGCCTGCTGTTCTCGTAAGGAACGCATCCTGATGCTGATGGAGAAACT
    GACCAGTCCTGGTTGCGATTGCGGTATATCTCGCCCCTGCCTGACCCAACAACTTTTCCGGGAACTAACACTACTCCTGA
    GATCAGAAAAAGATGATGCAGTTGCACCAGCGGATGAAGCTAGCCCACCGTGCCTAACCTTCGATGAGTGCTGTACGGCC
    CAACATGCTGGCAATGGGGAAGGCGATCCAGTCGAAAAACCCCCGTCAAAGAGAGAGCTCCAACGAGTCGAGTGCTTTCA
    TCAACTGGAGGAATACCTCTGCAAGTGCTTCCTGCCGCCGGCAGAACCTCAGATTCCTGAGACCGATATCTATGCTTTTG
    AACTAGATCCGGACTTTCCACCAGAACCTGAGCCAAAATCTCCCAAGGAAAATGACAACATGCAACCTTGTCAGTGCCCG
    GAACAATTCTTTGACATTGGAAATGCACTAACCTGTTCGGGTGATGGCTTGGATGATGACTTCTTTCGTGATTGTGAGGA
    TGACGAGGAAGTAAAAAAGTTCGAAAGTAAGGATGATGGTAAAGCAACCACGGAGCCGGATCTCTGCCAATCTCTTAAAG
    CATTCATCGACAAGGAACTGCAAGAAATTCTTGCGGAGGAGGCCAATAAGGAAGGCGAGGAGGTAGAAGAAAAAACTCCT
    AGCACAGTACTAAGGGAAATCTGTGAGAGACCCACAACCGTGGCGTCACCGGAAGAAGAGGAGAAACCAGAACAGATTGA
    GTGTCCATTTGCTGGCATGGTGTCCTGTCCTCCTTGGACCACACAGCAAACAGACTGGGCAGCCTTCCCCTACAACTTAG
    ATCCCTGTGCGCAAAAGGAGTCACCTAGCCCGGCGCCCCGGGGTCCACGTACTGGGCTATTGCCCGAAGGACCTCTGTCA
    CCCGATATGAGGAACCTCTGCGAGCAGCTTTTGCGAAAAGCTCTTAAGGATTGTGGTCTGTGTGGTGGTGACGATGTGTA
    CTCCTGCGAGGACGATGTATGCGAAGAGTGCGCGCTGAATTGTGAGGAATGCCCGGAAGATTGCCCGTTGGAAAAGTGCG
    AGGAATGCGATGATGAGTGTCCCCCAGAACAACAAGGATGCCTATGCTGCCACTGTCGCGCTCTCATATGCGACGAGGAG
    TGCAAGACGGTTGCCAATACCCTGCGCTCCGGAATGTGTGATCCACTCTGCGAAATGAAATACTTTATAGACTCCATCAT
    CGTTGATATGCATGCCATGGATTGTGTGCTCGGCAACAAGAAAGCGAAACCAAAGCACCTTAAGGCTACAGACTTGACCA
    ACAGAGGTGGACCCGGCGATAGTTTTCCCGTCAAAATTAAGAGTGTGTGGCCATTGGGTAACACCGCTCTCTACGTCCAA
    TGGCAATTGGAGGACTGTCGCGCTGTAGCAGGATATGAGATTTACTTGGATGGGCATTTGACGAACCGATTTTACAGTTT
    TCGTCACGAGGCCGGAGTTATTACCAATGCGGATGTGACCAATCCGCACCAGGTTGTGGTGCGCGCCGTAGCGGTGGGTC
    AGGAGTTTCCCGGCGAGGGTCCGGGTAAGGATGCGACCCAGGAATGTGGCTGCCAGGCGGTGGCACTTGCTCATCCCGAA
    TTGAAGGCGGGAGCACAGAGGCCGTGGTCGCCCAGTCTCTACTATTATGATCCCAACCAATTGCCGCCGGCGGAGGACGT
    GCAGCCGTGCTAGTCATGAATCATATGTATATCATTATATCGAATATCGTCGGATATCACCGTTATCGGAACAAAGGAGC
    TAAACGCTCCCTCACTTTTTAGCTTGTACATATAGCGTATTGATATGTAGTGTTTGTTAAGAGTTCTTTATCTGGAGGAT
    ACCAATTGAAATCGTCTGTACGTAGTGCTTTGCATAGTGCCTTAAATCGTAATAGTATATCGTAAGCAAATATCAATGCA
    TTGTAATGGAATTGAAAGCAGGTGGCTTCATTCCGATGGCACGTTTGAGTTCACCAACACCAAATTCACTTTAAATAAAT
    GAATCTCATTGTTAGAGATG
    
    Other Products of this Gene
    Other Transcripts
    Name
    FlyBase ID
    Length (nt)
    FBtr0301876
    6324
    FBtr0332500
    7761
    FBtr0332501
    7694
    FBtr0332502
    3253
    Polypeptides
    Derived from THIS transcript
    Name
    FlyBase ID
    Length (aa)
    FBpp0390639
    1264
    Derived from OTHER transcripts
    Name
    FlyBase ID
    Length (aa)
    FBpp0291090
    879
    FBpp0304776
    1226
    FBpp0304777
    1264
    FBpp0304778
    796
    Comments

    Dicistronic transcript; alternative monocistronic transcript(s) exist.

    Transcript terminates at site supported by polyadenylated cDNA.

    transcript_exception: dicistronic_mRNA

    External Crossreferences and Linkouts ( 1 )
    Crossreferences
    RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
    Synonyms and Secondary IDs (1)
    Reported As
    Symbol Synonym
    Pif1A-RJ
    Secondary FlyBase IDs
      References (0)