FB2024_03 , released June 25, 2024
Transcript: Dmel\Smg5-RB
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General Information
Symbol
Dmel\Smg5-RB
Species
D. melanogaster
Annotation Symbol
CG8954-RB
FlyBase ID
FBtr0080562
Feature type
mRNA
Associated gene
Dmel\Smg5
Evidence Rank
Length (nt)
4809
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 32 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
    End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        Sequence
        Sequence Downloader
        GTTGTTTAACAAAGGAAGAGCGAAAACGTGAAATTTGCAGAACGACACACCAAACAGAGCAACTAAATCCGCATAAAAGG
TAATGCAAATCGCGCAGGTAAACAGTTGATGGACGTCATTTGATTCTACCTGAGCGCTGCTGGCAAAAGTGCATCCAAAT
AACGCAGCGCAGCAGCGCATCGCATAGTTTTTTTTCGCAATCGCAATTGCTGCAGTATCGAAAATACCAGAGCAGAGAAA
AGCAAAAAGGCAAAAGCAAAAAGTATCTGTTACCTCGAACAATGGAGGTGACATTCAGCTCGGGCGGATCATCGAACGCC
TCCAGCGAGTGCGCCATAGACGGCGGCACGAATCGCTGTCGCGGCTTGGAGCCCAACAATGGAACCTGCATCCTCAGCCA
GGAGGTAAAGGATCTTTACAGATCCCTCTACACCGCCTCCAAGCAACTGGACGATGCCAAGAGGAATGTGCAGTCGGTGG
GACAGCTGTTCCAGCACGAAATCGAAGAGAAACGCTCGCTCCTAGTGCAGCTGTGCAAGCAGATCATCTTCAAGGACTAC
CAGTCGGTGGGCAAGAAGGTGCGCGAGGTGATGTGGCGACGTGGATACTACGAGTTCATTGCCTTCGTGAAGAAGAACTG
GCACAAGCAGTGCCAGGATGCGGCCACGGCCCAAGAGAACATGCAAAAGCTGGAGCGATTCCTCTGCGCTGGCATCTTCA
ACTACAAACGATTGTCGGCACGCATGGAAGAGATCTATGATCTGGATCTAAAGTATTTGATTGATTTCTCCATAATCAGT
GATGGCTACATAAGCGACATGATCGGAGACACCATGGAGTCATCGCACTCGGGCACCCACGCGGTGGACAAGAGTCTGGA
GGCCGTGTCCTTTGCACTCGACACCATACACTCATCGCTGCTCAGTCTGGGCGATCTTCATCGCTACTTTCTAGACTTTC
GCATCGACAGCAAACTAAGCATAAGCAAGGAGCAGGTGGCCAAGTATTATCTGGAGGCCTTCAAGCTTAATCCGGCCATT
GGCATGGCCCAGAACCAGTTGGGTACACTGCACTACGGACAGAATCATGACCTGGACTCCACTTACCACTACTTGTACTC
CCTTGTGTGCATCATACCATTCGAACTAAGCGAAAATAATCTTAACAAGCTGTTCGCCAAGCACACCGAATACCTAGAGC
GTATGGATCCAGAAAAACTAGACTTCAACATCGAGGACTTCTTTGCCCGTTTCTATCTGATTGTGGACATATTTTTCTTC
GACAAGGAAGTGCCGGACTTTAACGCTCTGTGCCACTGTGTGCTGATTGATCTACGCAAGATCCTGTGCTCCCAGCAGCT
GCGCGTTCCGGAGCCAAGCATCTTCAAGATTGTCTCCATTCTGTTCTTCTGTCTGTCCAAGCTTAAGATGATCAACTCAC
CAAAGGTTTACTCGCTGCACGCCTTTCTGGTTGCTGCCTGTTCCGATCTGATGGACGCCTGCATCGTCAGCATCGAGCAG
ACAATCCTGGCTCGCGCCCAAGACAACGAGCGCTTCCAGGCGGAGTACGAGGAACGCTTTCAGGAGTTCGATACTGTGGT
GCGCAAGTCCCGGAATGAGTACAAGAACTGGCTAGCTGCAGTAGGCGAATGTGAGCGCAAGGACAAGAAGTTGATGCCAC
GCCCGCACTCTCTAAAGGATTGCAGTTCGGATTCGCGGGACAGCCAGCACTCTGGCGAGGAGGCAAAGACCCAGGAGGCT
GCTGACGGCGACAAGATCGGTGAGGCCGTTTCCACGCGCTCCAGTGACGAGGCCAAGGAGTCCGACCTTAAGACCCCGCT
CTCCTGCAAGAGCAAGCGACGGGGAATGCGTCTACGCCGCCGACGCCGCAAGATCGCCCAGTCGGACGACAGCTCCTGCT
ATGACAGCGAAAGCGAACTGGACACAGACTTTTACAGCGACGAGGAGGATTACACAGATCTAAGTTCTAACTTTGACACC
GATTTCAGCGACATTGATGCAGCTGATCCTGGGGAGCCATGCGGCGAAGAGCGCTATGCAGCAGCTAATTACAGCAAAAA
GGAGCGCAAAGCTGGCGGCGGCGGCGGAGGAGGAGTCGGTGGCGTGGTGTACTCCGACAACGAAGACGTTGTTATTGAGG
AGGAGAAAATCGTGTATCCCAACGAAGTAGAGCGCAGATCCAACTCACAGGAGGCGGACTCTGAGGAGTTGCTGCGCAGC
TTTGAGGTACTGCAGCTGAACTTTAAGAGCGCAGAGGATGCTCAAAGCAAGCCGGTGGCACCTCCGCCCGTCAGCTTTTC
AGAGCCACCAAAGAAGCTGGTTTATCGCAACAAGTACACCAAGATCAATCCCAACATAGTCATTGACTGTCTGCACAATG
AACCGACCATTAGAGCCCTGAAAATGCTTTTTGACTGGCTGCGAATCAACCCAGAGATTCTCATCGGCTGCTACCACTCG
AATCCGGAGTTTGTGCACAAGATCATGAAGCTTCTCAACTACTGCAACATCGACATCTTCACCAGGAAGGTTTACTTCGA
GCGCGACCTTCTGACCACTGCCAACGTGCGTGATTCTCTGGTCGAGTTATTCGATGTGCGCGCCAACGTTCCGCTCACCG
AGGACTTTGCTTTCAAGAACTTTGACATCTTCCAGAGCACCCAGATTACACTGGACTGGGAGACCATTATCCGGGAGCGT
GTCACTCCCCAGGAAGAGTCCATTCTCCGTATTTTCAAAATGGTCGACTTTGGCTTTTTCATTTGCAAGCAGAAGAAGTT
TAACTACAGATTCTGCGTCAAGACGCGTCGTTTCACCGAGACCCAAAAGAAGAAACAGCGCGAGGAGAAGAAGGGAGGCG
GATCACGTCGCCGCGAGCGTCGTACCGCTCCGAAGACCAACCGAACAAAGCGGAACGAAGGACGCACACGTCGCTACTCC
GATCGCAAGAACGGCATCGTCCGCAAGAGCTACACCAGTAACGAGGAAAAGGACACCGTGGAGGAGTGCCGCAAGATGCC
ACGCAAGGGTTACCTAAGGAATCGCAATGCCGAGAAGGCGGCTGCTGTTATAACCAGTGCCACGGGAACCTCTGTCGCCG
GCGGAACCTCCGCCTCCACAACCACAAACAGTGTCATCGAGAAACTGAATTTGCAGTCCAGCTCGGGGGCCGACGAAGAG
CGCTCGGAGGCCAAGTCGAAGAAGTGTGAGCTCATGGGCAAGCTGTGGCTGCAAAACGAGGTGGAGACTTTGGAGGAGGA
GCTGCGGGACAGTCCCGCTCATGTGGTGATGTCCCCATTTGTGGTGGTCGATTCGAAGGCATTGACCGAATACAATGGCA
TAGTCAAGTCGCTGGTGAGGACCAAGAAGTGCATTGTCCTCATTCCAAATGCAGTGCTCAATGAGTTGGATGACTTGAAG
AAACGCAGCGAGAATGTGCGCCATGTCATCCGTTGGCTGGAGCAGGAGTTTAAACAGGGCAATAGGCACTTGCGTGCCCA
GCGCGATAACGAAAGTCAGCCGCTATCCCTGCTGAAGATATCACGCAAGATGGATCGTGACGCCTCAGTTTTCCTTCAAA
TTGCCCAGTTCTGCAATCACTTGGTGGCCAACCATGCCGATCCGCACGTCAGCGAACTGCAGAAGAGCGTCGTCACGTAC
TTGTCCGGCGATAATTTGCACGAGAAGAACCGCCAGCAACAGAACTTCAGCTACACCGGCATCCTTGACTCGATACCCGT
ACGCTATGCCCAAATCCAGAGCTTCTACGCAAAATTTAAGGCCAACAAAAAATGAACGGGCCCAAGTGGAGCGGCAACGG
TAGCGGGCGCTAAGGCGGCAAAGGCAACTGCAGACCAAATGCAATGCGAGCTAAAAAGGGTGCGAGCGTGTTCTCTCTGT
ACAACCACAAATCGACATGGAGTTCCAAAGTTAACGATGGCCGTGGACGACGGCAAAACCAAACCAGCAATCGCTGCTGC
AGCTTCGGTTGTGGCCGTGTTTTCCCCAAAAAAAAACTGAAACTGAAACTGTTACCATCAGCCGGAGCAAGATTCCGCCA
GCCTAGCCTGTGCAGCAGCAGCATTGCGAATTTGCTTGTTGTGTTTAGACCAAACTAAAACAAAATACCAATCAAAATCG
TTCACTTTCAACTCGATGGCTACAATGATGACGACCTCCCAGCAAATGTTAAGTGGACAATGGCAAACGCACAATCATCA
ACAAAAATTCTTAAGAGAAAAAAATCGTAAAAAAAAAATATCAATCAATCGAACAACTTTTCAAGATAACGACAGGCATG
ACCTGAGCGGTTCACGGACAGAAGATCTTCGTGGAACAGTTGGGAGAGCGGAATGACGGCGACCAGGACGGATCGACCTT
CTAATCGGTTATTTGCTTGATGTACCATGTCGTATTCAAGATTTCGCATTTCCTGTGTCGGGCTGGACTATGGATCCAAA
AACTCTTGATCTTTCCTGCAGTTGTGTTTCGTTCTCGGTTTTGCAGACAGAGTTTATTTAAATTTTCACGCTTCTGACTA
GGCAATCCGCGTGATCCTCTTCGCAAGAACAAAGTATATGGTATACATATATATATATATAAAACTTACATTTTAATGCA
GTCCCTAAAAACTCTCTCTTGTGGTTCACCAATGCAATTTCCCATTACAAAATAAAGGAAAGTGCCGCACATATGTCAAC
AAAATTCTACGTCATTCTAAATGTTTCCAAAATTGAAAGTTATGTTACATTTTGTTTGAATAATAAAGCGCCCAACCACA
AAAAAATGT
        Other Products of this Gene
        Other Transcripts
        Name
        FlyBase ID
        Length (nt)
        Smg5-RA
        FBtr0080561
        4021
        Smg5-RC
        FBtr0343669
        4102
        Polypeptides
        Derived from THIS transcript
        Name
        FlyBase ID
        Length (aa)
        Smg5-PB
        FBpp0080139
        1177
        Derived from OTHER transcripts
        Name
        FlyBase ID
        Length (aa)
        Smg5-PA
        FBpp0080138
        1177
        Smg5-PC
        FBpp0310261
        1177
        Comments

        Extended 3' UTR based on RNA-Seq and/or EST data.

        External Crossreferences and Linkouts ( 1 )
        Crossreferences
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        Synonyms and Secondary IDs (2)
        Reported As
        Symbol Synonym
        CG8954-RB
        (FlyBase, 1996-)
        Smg5-RB
        (FlyBase, 1996-)
        Secondary FlyBase IDs
          References (2)