FlyBase Insertion Report: Dmel\P{lacW}vimar[B6-2-30]

General Information

Symbol

Dmel\P{lacW}vimar^B6-2-30

Species

D. melanogaster

Name

FlyBase ID

FBti0009168

Feature type

transposable_element_insertion_site

Description

Inserted Element

P{lacW}

LINE ID

Affected gene(s)

Ecol\lacZ, vimar

Viability / fertility

fertile, viable

Associated allele(s)

Ecol\lacZ^{vimar-B6-2-30}, vimar^B6-2-30

Stock availability

None publicly available

Genomic Location

Chromosomal Location

2R ( 42E1 )

Sequence Location

2R:6,985,680..6,985,680 [-]

Target / Docking site

Genomic Maps

JBrowse

Member of Large Scale Dataset(s)

Dataset

Description

Detailed Mapping Data

Chromosome (arm)

Sequence Location

2R:6,985,680..6,985,680 [-]

(Lo and Frasch, 1998)

Orientation

Cytological location (computed by FlyBase)

42E1 (inferred by FlyBase from sequence location)

Cytological location (reported)

Insertion into Natural transposon

Comments concerning location

Sequence Data

Flanking sequence

Inserted Element

Construct

P{lacW}

Size (Kb)

10.691

Component Allele(s)

w^+mC

Molecular map

Affected Gene(s)

Insertion may affect gene

Ecol\lacZ

(Zaffran et al., 2001, Hartenstein and Jan, 1998.8.10, Lo and Frasch, 1998, Bodmer, 1993, Hartenstein and Jan, 1992, Bodmer et al., 1990)

vimar

(Bodmer et al., 1990)

Variant Molecular Consequences

Phenotypic Data

Associated Allele

Phenotypic Data

Ecol\lacZ^{vimar-B6-2-30}

Phenotypic Class Phenotype Manifest in Detailed Description

vimar^B6-2-30

Phenotypic Class Phenotype Manifest in Detailed Description

Expression Data

Reporter Expression

distribution deduced from reporter

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 12

embryonic/larval visceral muscle cell

(Hartenstein and Jan, 1998.8.10)

embryonic/larval somatic muscle cell

(Hartenstein and Jan, 1998.8.10)

embryonic stage 12 -- 17

embryonic/larval hypodermal muscle cell | presumptive

(Hartenstein and Jan, 1992)

dorsal pharyngeal muscle cell | presumptive

(Hartenstein and Jan, 1992)

embryonic stage 13

midgut longitudinal visceral muscle primordium

(Zaffran et al., 2001)

hindgut visceral muscle primordium

(Zaffran et al., 2001)

Additional Information

Statement

Reference

Marker for

Reflects expression of

vimar

(Zaffran et al., 2001)

Reporter construct used in assay

Data on Genetic Line

Line ID

Origin as a multiple insertion line

Progenitor(s) within the Genome

Related Aberration or Balancer

Aberration

Balancer

Stocks (0)

External Crossreferences and Linkouts ( 0 )

Comments

P{lacW} insertion 16bp downstream of the start site of the 3.5kb cDNA, GB:AF034421

(Lo and Frasch, 1998)

Synonyms and Secondary IDs (5)

Reported As

Symbol Synonym

B6-2-30

(Zaffran et al., 2001)

P{lacW}B6-2-30

(Bodmer, 1993, FlyBase, 1992-)

P{lacW}vimar^B6-2-30

(Lo and Frasch, 1998, FlyBase, 1992-, Bodmer et al., 1990, Jan, 1990.8.1)

P{w^+mC=lacW}B6-2-30

(FlyBase, 1992-)

vimar-lacZ

(Zaffran et al., 2001)

Name Synonyms

Secondary FlyBase IDs

FBti0001064
FBti0005749

References (8)

Report Sections

Open Close