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Citation
Branson, K., Robie, A.A., Bender, J., Perona, P., Dickinson, M.H. (2009). High-throughput ethomics in large groups of Drosophila.  Nat. Methods 6(6): 451--457.
FlyBase ID
FBrf0215369
Publication Type
Research paper
Abstract
We present a camera-based method for automatically quantifying the individual and social behaviors of fruit flies, Drosophila melanogaster, interacting in a planar arena. Our system includes machine-vision algorithms that accurately track many individuals without swapping identities and classification algorithms that detect behaviors. The data may be represented as an ethogram that plots the time course of behaviors exhibited by each fly or as a vector that concisely captures the statistical properties of all behaviors displayed in a given period. We found that behavioral differences between individuals were consistent over time and were sufficient to accurately predict gender and genotype. In addition, we found that the relative positions of flies during social interactions vary according to gender, genotype and social environment. We expect that our software, which permits high-throughput screening, will complement existing molecular methods available in Drosophila, facilitating new investigations into the genetic and cellular basis of behavior.
PubMed ID
PubMed Central ID
PMC2734963 (PMC) (EuropePMC)
Related Publication(s)
Note

The ethomics era?
Reiser, 2009, Nat. Methods 6(6): 413--414 [FBrf0215534]

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Secondary IDs
    Language of Publication
    English
    Additional Languages of Abstract
    Parent Publication
    Publication Type
    Journal
    Abbreviation
    Nat. Methods
    Title
    Nature Methods
    Publication Year
    2004-
    ISBN/ISSN
    1548-7091 1548-7105
    Data From Reference
    Alleles (1)
    Genes (1)