From: Kevin Cook <kcook@XXXX> To: flybase-updates@XXXX Cc: Stacey Christensen <sjchristXXXX>, Kim Cook <ruacookXXXX>, kaufman@XXXX Subject: Isolation and characterization of Df(1)BSC535 Date: Wed, 11 Jun 2008 14:30:05 -0400 ( 19:30 BST) Isolation and characterization of Df(1)BSC535 Stacey Christensen, Kim Cook and Kevin Cook Bloomington Stock Center Indiana University Df(1)BSC535 was isolated as a FLP recombinase-induced recombination event involving PBac{WH}CG3973[f02378] and P{XP}d07531. The deletion was isolated as a chromosome lacking miniwhite markers in progeny of PBac{WH}CG3973[f02378]/P{XP}d07531; MKRS, P{hsFLP}86E/+ females crossed to Binsinscy/Y males. These females were heat shocked as larvae as described in Parks et al., Nature Genetics 36: 288-292, 2004 (FBrf0175003). This cross and crosses in preceding and succeeding generations maintained the original genetic background of the Exelixis insertion stocks (Thibault et al., Nature Genetics 36: 283-287, 2004; FBrf0175002). The recombination event generated the genetic element P+PBac{XP5.WH5}BSC535 from the segment of PBac{WH}CG3973[f02378] to the left of its FRT site and the segment of P{XP}d07531 to the right of its FRT site. Its presence was verified using the PCR methods and primers described in Parks et al. The cytological breakpoints of Df(1)BSC535 predicted from the Release 5 genomic coordinates of the transposable element insertions sites are 6C2;6C8. It failed to complement Mcm6[K1214], but complemented scp[1]. __________________________________________________________ Kevin Cook, Ph.D. Bloomington Drosophila Stock Center Department of Biology http://flystocks.bio.indiana.edu Jordan Hall 142 Indiana University 812-856-1213 1001 E. Third St. 812-855-2577 (fax) Bloomington, IN 47405-7005 kcook@XXXX