From: Kevin Cook <kcook@XXXX> To: flybase-updates@XXXX Cc: Kim Cook <ruacookXXXX>, Stacey Christensen <sjchristXXXX> Subject: Isolation and characterization of Df(3L)BSC413 Date: Tue, 15 Apr 2008 14:18:31 -0400 ( 19:18 BST) Isolation and characterization of Df(3L)BSC413 Stacey Christensen, Kim Cook and Kevin Cook Bloomington Stock Center Indiana University Df(3L)BSC413 was isolated as a FLP recombinase-induced recombination event involving P{XP}d01629 and PBac{WH}MICAL-like[f05713]. The deletion was isolated as a chromosome lacking miniwhite markers in progeny of w[1118]; Dr[1]/TM6C, Sb[1] females crossed to P{hsFLP}1, y[1] w[1118]; P{XP}d01629/PBac{WH}MICAL-like[f05713] males. The males were heat shocked as larvae as described in Parks et al., Nature Genetics 36: 288-292, 2004 (FBrf0175003). This cross and crosses in preceding and succeeding generations maintained the original genetic background of the Exelixis insertion stocks (Thibault et al., Nature Genetics 36: 283-287, 2004; FBrf0175002). The recombination event generated the genetic element P+PBac{XP5.WH5}BSC413 from the segment of P{XP}d01629 to the left of its FRT site and the segment of PBac{WH}MICAL-like[f05713] to the right of its FRT site. Its presence was verified using the PCR methods and primers described in Parks et al. The cytological breakpoints of Df(3L)BSC413 predicted from the Release 5 genomic coordinates of the transposable element insertions sites are 69C2;69F5. Df(3L)BSC413 failed to complement Ptp69D[1] and Df(3L)ED4483. __________________________________________________________ Kevin Cook, Ph.D. Bloomington Drosophila Stock Center Department of Biology http://flystocks.bio.indiana.edu Jordan Hall 142 Indiana University 812-856-1213 1001 E. Third St. 812-855-2577 (fax) Bloomington, IN 47405-7005 kcook@XXXX