Date: Tue, 29 Aug 2006 15:38:01 -0400 To: flybase-updates@XXXX From: Kevin Cook <kcook@XXXX> Subject: Isolation and characterization of Df(3R)BSC174 Isolation and characterization of Df(3R)BSC174 Jill Gresens and Kevin Cook Bloomington Stock Center Indiana University Df(3R)BSC174 was isolated as a FLP recombinase-induced recombination event involving PBac{WH}f00382 and P{XP}CG31531[d00921]. The deletion was isolated as a chromosome lacking miniwhite markers in progeny of w[1118]; Dr[1]/TM6B, Tb[1] females crossed to P{hsFLP}1, y[1] w[1118]; PBac{WH}f00382/P{XP}CG31531[d00921] males. The males were heat shocked as larvae as described in Parks et al. Nature Genetics 36: 288-292, 2004 (FBrf0175003). This cross and crosses in preceding and succeeding generations maintained the original genetic background of the Exelixis insertion stocks (Thibault et al., Nature Genetics 36: 283-287, 2004; FBrf0175002). The recombination event generated the genetic element P+PBac{XP5.WH5}BSC174 from the segment of PBac{WH}f00382 to the left of its FRT site and the segment of P{XP}CG31531[d00921] to the right of its FRT site. Its presence was verified using the PCR methods and primers described in Parks et al. The cytological breakpoints of Df(3R)BSC174 predicted from the transposable element insertions sites using Release 4 coordinates are 82C1;82D1. It failed to complement Karybeta3[j3A4]. __________________________________________________________ Kevin Cook, Ph.D. Bloomington Drosophila Stock Center Department of Biology http://flystocks.bio.indiana.edu Jordan Hall 142 Indiana University 812-856-1213 1001 E. Third St. 812-855-2577 (fax) Bloomington, IN 47405-7005 kcook@XXXX