FB2024_03 , released June 25, 2024
Physical Interaction report
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General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000101473
Interaction Network
Interactions Browser links
da network
l(1)sc network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0053886-3.coIP.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note

T3

bait

[35]S label

da 

DA

prey

[35]S label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced and labeled by in vitro translation; prey produced and labeled by in vitro translation.

The da-l(1)sc interaction is stronger than da-ac, which is stronger than da-sc.

FBrf0053886-4.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
da 

da

bait

T3

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
C-terminal region
sufficient binding region
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast, using a lacZ reporter under the control of hb regulatory sequence.

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

FBrf0065441-1.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
da 

da

neutral component
da 

da

neutral component
da 

da

neutral component

lsc

neutral component

lsc

neutral component

lsc

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

A [32]P labeled DNA probe consisting of an E box from a ase regulatory fragment was was mixed with da and/or l(1)sc. Cooperative binding to the DNA was observed by EMSA.

Interaction in vitro; proteins produced as a recombinant fusion proteins in bacterial system.

FBrf0075104-5.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
da 

da

bait

lsc

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Two-hybrid system: yeast, using a lacZ reporter under the control of hb regulatory sequence.

The hb reporter construct responds more strongly to the da-sc combination than to the da-l(1)sc combination, or to da alone. sc or l(1)sc alone do not have activity.

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey was previously cloned reagent).

FBrf0076959-1.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
da 

DA

neutral component
da 

DA

neutral component
da 

DA

neutral component

LSC

neutral component

LSC

neutral component

LSC

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

A [32]P labeled DNA probe was mixed with da and/or l(1)sc. Cooperative binding to the DNA was observed by EMSA.

da-l(1)sc form a protein:DNA complex that is distinct from complexes observed in the presence of da l(1)sc or alone.

Interaction in vitro; proteins produced as a recombinant fusion proteins in bacterial system.

FBrf0100349-3.Y2H
Description
physical association
Assay
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
da 

DA

bait

fused to GAL4 DNA-binding domain

da 

L'sc

prey

fused to GAL4 activation domain

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
da 
C-terminal region
sufficient binding region
aa 518-710

DeltaN construct used for screen

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was yeast cell line; bait produced as transgenic fusion protein; prey produced as transgenic fusion protein (prey from genomic expression library).

Two-hybrid system: yeast GAL4-BD/GAL4-AD

FBrf0108816-1.EMSA.A
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
da 

Da

neutral component
da 

Da

neutral component
da 

Da

neutral component

Lsc

neutral component

Lsc

neutral component

Lsc

neutral component
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; proteins produced as a recombinant fusion proteins in bacterial system.

da-l(1)sc form a protein:DNA complex that is distinct from complexes observed in the presence of da l(1)sc or alone.

A [32]P labeled DNA probe was mixed with da and/or l(1)sc. Cooperative binding to the DNA was observed by EMSA.

External Crossreferences and Linkouts ( 1 )
Linkouts
MIST - An integrated Molecular Interaction Database
References (6)