FB2024_03 , released June 25, 2024
Physical Interaction report
Open Close
General Information
Interaction Type
Interacting Genes
FlyBase ID
FBig0000098705
Interaction Network
Interactions Browser links
ex network
esyN Network Diagram
Show neighbor-neighbor interactions:
Select Layout:
Legend:
Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0125175-2.FW.TV
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ex 

EX

bait

GST tag

ex 

EX

prey

GST tag, biotin label

ex 
ex 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ex 
CNTR domain
sufficient binding region
aa 1-399
ex 
C-terminal region
sufficient binding region
aa 773-1429
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced as a recombinant fusion protein in bacterial system; prey produced as a recombinant fusion protein in bacterial system.

The CNTR domain of ex (GST tag) binds to the C-terminal region of ex.

Bait protein was separated by SDS-PAGE and transferred to nitrocellulose, then incubated with biotinylated prey protein.

FBrf0253974-1.PD.MS
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ex 

ex

bait

GFP tag

ex 

ex

prey
ex 
ex 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ex 
N terminal domain
sufficient binding region
aa 1-653

coordinates relative to ex-PA

ex 
C terminal domain
sufficient binding region
aa 654-1427

coordinates relative to ex-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait produced from transfected construct; prey derived from S2 cell extract.

FBrf0253974-2.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ex 

ex

bait

FLAG tag

ex 

ex

prey

HA tag

ex 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ex 
C terminal domain
necessary binding region
aa 912-1164

coordinates relative to ex-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0253974-3.coIP.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ex 

ex

bait

HA tag

ex 

ex

prey

FLAG tag

ex 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ex 
C2 terminal domain
necessary binding region
aa 912-1164

coordinates relative to ex-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from transfected construct.

FBrf0253974-4.PD.WB
Description
physical association
Collection
Source/Stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
ex 

ex

bait

FLAG tag

ex 

ex

prey

MBP-His tag

ex 
ex 
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
ex 
C2 terminal domain
necessary binding region
aa 912-1164

coordinates relative to ex-PA

ex 
C1-2 terminal domain
sufficient binding region
aa 654-1164

coordinates relative to ex-PA

Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait and prey produced as recombinant fusion proteins in bacterial system.

External Crossreferences and Linkouts ( 0 )
References (2)