M(3)85E
Please see the JBrowse view of Dmel\RpS29 for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Low-frequency RNA-Seq exon junction(s) not annotated.
Gene model reviewed during 5.47
Component of the 40S small ribosomal subunit.
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\RpS29 using the Feature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
JBrowse - Visual display of RNA-Seq signals
View Dmel\RpS29 in JBrowsePlease Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
Minute gene.
Deletions removing RpS29 but no other cytoplasmic ribosomal protein-encoding genes show Minute phenotypes.
Molecularly-defined mutations in RpS29 result in Minute phenotypes.
dsRNA has been made from templates generated with primers directed against this gene. RNAi of RpS29 causes an increase in the number of class I da neurons and alterations in the number of MD neurons.
Area matching Drosophila EST AA821194. This EST forms a 987bp contig with ESTS AA736168 and has sequence similarity to Human 40s ribosomal protein s29. Probable intron in gene represented by EST AA821194.
Identification: By virtue of the Minute phenotype of the segmental deficiency produced between T(Y;3)G42 and T(Y;3)L17 Df(3R)85E2-4;86A and equated to M(3)S31 (Lindsley et al., 1972). M(3)S31 subsequently shown to lie in 86D (Ashburner et al., 1981) and this Minute deficiency mapped to 85E2-F1 and renamed M(3)LS5 (Kemphues, Raff and Kaufman, 1983).
One of a class of genes (see MIN record) that when present in one, rather than two, copies, produce a characteristic phenotype consisting of short slender bristles and delayed development.
Source for merge of: CG8495 anon- EST:fe3B4
Source for merge of: RpS29 M(3)85E
Source for merge of: CG8495 BcDNA:AT28563
Source for merge of: CG8495 BcDNA:AT13329s
Source for merge of: RpS29 anon-WO0118547.360
Source for merge of: CG8495 BcDNA:RH06643
Source for merge of CG8495 BcDNA:AT28563 was a shared cDNA ( date:030728 ).
Source for merge of CG8495 BcDNA:AT13329 was shared cDNA (AT13329) ( date:030602 ).
Source for merge of RpS29 anon-WO0118547.360 was sequence comparison ( date:051113 ).
Source for merge of CG8495 BcDNA:RH06643 was TrEMBL update ( date:020807 ).
