FlyBase Gene Report: Dmel\Ak3

General Information

Symbol

Dmel\Ak3

Species

D. melanogaster

Name

Adenylate kinase 3

Annotation Symbol

CG6612

Feature Type

protein_coding_gene

FlyBase ID

FBgn0042094

Gene Model Status

Current

Stock Availability

9 publicly available

Enzyme Name (EC)

nucleoside-triphosphate--adenylate kinase (2.7.4.10)

adenylate kinase (2.7.4.3)

Gene Summary

Contribute a Gene Snapshot for this gene.

All Summaries

Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

Adk3

Key Links

Genomic Location

Cytogenetic map

86C7-86C7

Sequence location

3R:10,887,345..10,889,588 [-]

Recombination map

3-50

RefSeq locus

NT_033777 REGION:10887345..10889588

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (10 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

enables adenylate kinase activity

inferred from direct assay

(Fujisawa et al., 2009)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

enables adenylate kinase activity

inferred from electronic annotation with InterPro:IPR006259, InterPro:IPR007862, InterPro:IPR036193

(InterPro Project Members, 2004-)

inferred from biological aspect of ancestor with PANTHER:PTN000599576

(GO Reference Genome Project, 2011-)

enables ATP binding

inferred from electronic annotation with InterPro:IPR000850, InterPro:IPR006259

(InterPro Project Members, 2004-)

enables nucleoside triphosphate adenylate kinase activity

inferred from biological aspect of ancestor with PANTHER:PTN008598552

(GO Reference Genome Project, 2011-)

Biological Process (4 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (4 terms)

CV Term

Evidence

References

involved_in ADP biosynthetic process

inferred from sequence or structural similarity with UniProtKB:P29411

(Gene Ontology Curators, 2002-)

involved_in AMP metabolic process

inferred from biological aspect of ancestor with PANTHER:PTN008598552

(GO Reference Genome Project, 2011-)

involved_in nucleobase-containing compound metabolic process

inferred from electronic annotation with InterPro:IPR000850

(InterPro Project Members, 2004-)

involved_in nucleoside triphosphate biosynthetic process

inferred from biological aspect of ancestor with PANTHER:PTN008598552

(GO Reference Genome Project, 2011-)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

located_in mitochondrion

inferred from high throughput direct assay

(Alonso et al., 2005)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

is_active_in cytoplasm

inferred from biological aspect of ancestor with PANTHER:PTN000599576

(GO Reference Genome Project, 2011-)

is_active_in mitochondrial matrix

inferred from biological aspect of ancestor with PANTHER:PTN008598552

(GO Reference Genome Project, 2011-)

located_in mitochondrial matrix

inferred from sequence or structural similarity with UniProtKB:P29411

(Gene Ontology Curators, 2002-)

located_in mitochondrion

inferred from electronic annotation with InterPro:IPR028586

(InterPro Project Members, 2004-)

Gene Group (FlyBase)

NUCLEOSIDE MONOPHOSPHATE KINASES

Protein Family (UniProt)

Protein Signatures (InterPro)

Catalytic Activity (EC/Rhea)

nucleoside triphosphate adenylate kinase activity

a ribonucleoside 5'-triphosphate + AMP = a ribonucleoside 5'-diphosphate + ADP (2.7.4.10)

RHEA 13749: adenylate kinase activity

AMP + ATP = 2 ADP (2.7.4.3)

RHEA 12973:

Summaries

Gene Group (FlyBase)

NUCLEOSIDE MONOPHOSPHATE KINASES -: Nucleoside monophosphate kinases catalyze the transfer of a phosphate group, usually from ATP, to a nucleotide substrate.

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\Ak3 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q9VGU6)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.49

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Ak3-RA

FBtr0082331

NM_079588

1301

216

Ak3-RB

FBtr0082330

NM_169373

987

216

Ak3-RC

FBtr0339378

NM_001300350

1515

216

Ak3-RD

FBtr0339379

NM_001300351

1215

216

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

Ak3-PA

FBpp0081807

24.1

216

9.89

FBpp0081806

24.1

216

9.89

FBpp0308469

24.1

216

9.89

FBpp0308470

24.1

216

9.89

Q9VGU6

NP_001287280

AHN57279

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

216 aa isoforms: Ak3-PA, Ak3-PB, Ak3-PC, Ak3-PD

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Q9VGU6

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Ak3 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

4.69

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

day 5 of adulthood & male -- day 7 of adulthood & male

spermatozoon

(Wasbrough et al., 2010, Dorus et al., 2006)

day 7 of adulthood -- day 49 of adulthood

adult heart

(Cammarato et al., 2011)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in mitochondrion

inferred from high throughput direct assay

(Alonso et al., 2005)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Ak3 in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Ak3

View exonic expression by tissue for Dmel\Ak3

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0042094

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

41318/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0042094

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0042094

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0042094

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG6612

Flygut - An atlas of the Drosophila adult midgut

FBgn0042094

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 3 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 8 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Ak3

Transgenic constructs containing regulatory region of Ak3

Aberrations (Deficiencies and Duplications) ( 2 )

Inferred from experimentation ( 2 )

Gene disrupted in

Df(3R)Exel6159

(Ryder, 2004.4.26)

Df(3R)Exel7306

(Ryder, 2004.4.26)

Inferred from location ( 0 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

partially lethal - majority die, with Scer\GAL4^pnr-MD237

Ak3^GD11977

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

Ak3^GD11977

viable, with Scer\GAL4^Mef2.PR

Ak3^GD11977

viable, with Scer\GAL4^tin.CΔ4

Ak3^GD11977

Other Phenotypes

Allele

short lived | heat sensitive, with Scer\GAL4^tin.CΔ4

Ak3^GD11977

some die during pupal stage, with Scer\GAL4^pnr-MD237

Ak3^GD11977

visible, with Scer\GAL4^pnr-MD237

Ak3^GD11977

Phenotype manifest in

Allele

trichogen cell, with Scer\GAL4^pnr-MD237

Ak3^GD11977

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (11)

Hsap\AK3

14 of 14

Yes

Hsap\AK4

12 of 14

Yes

3 of 14

3 of 14

2 of 14

2 of 14

Yes

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (9)

Rnor\Ak3

13 of 14

Yes

Rnor\Ak4

12 of 14

Yes

4 of 14

3 of 14

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

Yes

Mus musculus (laboratory mouse) (11)

Mmus\Ak3

14 of 14

Yes

Mmus\Ak4

12 of 14

Yes

3 of 14

3 of 14

2 of 14

2 of 14

2 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Xenopus tropicalis (Western clawed frog) (8)

Xtro\ak3

5 of 13

Yes

Xtro\ak4

5 of 13

Yes

Xtro\dedd2

5 of 13

Yes

Xtro\sbno2

4 of 13

Yes

3 of 13

1 of 13

1 of 13

1 of 13

Yes

Danio rerio (Zebrafish) (12)

Drer\ak3

14 of 14

Yes

Drer\ak4

12 of 14

Yes

4 of 14

3 of 14

3 of 14

2 of 14

2 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Caenorhabditis elegans (Nematode, roundworm) (7)

Cele\ZK673.2

13 of 14

Yes

4 of 14

2 of 14

2 of 14

2 of 14

1 of 14

1 of 14

Anopheles gambiae (African malaria mosquito) (6)

Agam\AgaP_AGAP009660

12 of 12

Yes

4 of 12

2 of 12

2 of 12

1 of 12

1 of 12

Arabidopsis thaliana (thale-cress) (12)

Atha\ADK

4 of 13

Yes

Atha\AMK2

4 of 13

Yes

Atha\AT2G39270

4 of 13

Yes

Atha\ADK1

3 of 13

Atha\AT3G01820

3 of 13

Yes

Atha\AT4G25280

3 of 13

Atha\AT5G35170

3 of 13

Yes

3 of 13

2 of 13

2 of 13

2 of 13

1 of 13

Saccharomyces cerevisiae (Brewer's yeast) (4)

Scer\ADK2

12 of 13

Yes

Scer\ADK1

3 of 13

Scer\URA6

2 of 13

Scer\FAP7

1 of 13

Schizosaccharomyces pombe (Fission yeast) (3)

Spom\adk1

3 of 12

Yes

Spom\SPCC1795.05c

2 of 12

Spom\SPCC830.11c

1 of 12

Escherichia coli (enterobacterium) (1)

Ecol\adk

3 of 11

Yes

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:Ak3. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (5)

Ak1

4 of 13

Ak2

4 of 13

CG9541

4 of 13

Cmpk

4 of 13

Ak6

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

AK3; adenylate kinase 3

14 of 14

609290

AK4; adenylate kinase 4

12 of 14

103030

AK2; adenylate kinase 2

3 of 14

103020

RETICULAR DYSGENESIS

reticular dysgenesis

AK5; adenylate kinase 5

3 of 14

608009

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Show neighbor-neighbor interactions:

Off

Show/hide secondary interactors
(data from AllianceMine provided by esyN)

Select Layout:

Force Directed

Circle

Concentric

Legend:

Protein

RNA

Selected Interactor(s)

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

MIST Molecular Interaction Search Tool

View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

Ak3 - CG17187

experimental knowledge based

(Guruharsha et al., 2011)

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

66461

DroID - A comprehensive database of gene and protein interactions.

FBgn0042094

MIST (protein-protein) - An integrated Molecular Interaction Database

41318

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel

KEGG Metabolic Pathways - A collection of manually drawn metabolic pathway maps representing knowledge of molecular interaction, reaction and relation networks.

Reactome Metabolic Pathways - An open-source, open access, manually curated and peer-reviewed metabolic pathway database.

Interconversion of nucleotide di- and triphosphates

External Data

Linkouts

KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-50

Cytogenetic map

86C7-86C7

Sequence location

3R:10,887,345..10,889,588 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

86C7-86C7

Limits computationally determined from genome sequence between P{EP}EP3340^EP3340 and P{PZ}tho¹&P{PZ}l(3)04629⁰⁵²⁷⁵

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

3-50

(FlyBase, 2016)

3-47.2

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (9)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

36072

y¹ sc^* v¹ sev²¹; P{TRiP.GL00490}attP2

57407

y¹ sc^* v¹ sev²¹; P{TRiP.HMC04712}attP40

Kyoto

112242

w^*; P{GawB}Ak3^NP0602 / TM3, Sb¹ Ser¹

112901

w^*; P{GawB}Ak3^NP2368 / TM3, Sb¹ Ser¹

VDRC

v110382

P{KK101091}VIE-260B

v42064

w¹¹¹⁸; P{GD11977}v42064

v342875

P{hsFLP}1, y1 w1118; P{HD_CFD02376}attP40/CyO-GFP

v341838

P{hsFLP}1, y¹ w¹¹¹⁸; P{HD_CFD00996}attP40/CyO-GFP

v342025

P{hsFLP}1, y¹ w¹¹¹⁸; P{HD_CFD01382}attP40/CyO-GFP

Genomic Clones (25)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (19)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

LP23885

Other clones

DPiM_LP23885

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0042094

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

GM21394

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0042094

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

Relationship to Other Genes

Source for database merge of

Source for merge of: Adk3 CG6612

(FlyBase, 1996-)

Additional comments

Source for merge of Adk3 CG6612 was sequence comparison ( date:010428 ).

(FlyBase, 1996-)

Nomenclature History

Source for database identify of

Source for identity of: Ak3 Adk3

(Fujisawa et al., 2009)

Nomenclature comments

FlyBase curator comment: Renamed from Adk3 to Ak3 because (i) 'Ak' is the standard abbreviation for 'adenylate kinase' (this enzyme), whereas 'Adk' is the standard abbreviation for 'adenosine kinase'; (ii) an 'ak' (rather than 'adk') prefix has been used in all papers that focus on the Drosophila gene/protein, including the first to characterize it (this one - FBrf0210460); (iii) we are already using the 'ak' prefix for the 'Ak6' gene.

(Fujisawa et al., 2009)

Etymology

Synonyms and Secondary IDs (10)

Reported As

Symbol Synonym

AK3

(Noma et al., 2000)

Adk3

(Meltzer et al., 2019, Japanese National Institute of Genetics, 2012.5.21, Wasbrough et al., 2010, Shim et al., 2009, Harvey et al., 2008, Buszczak et al., 2007, Dorus et al., 2006)

Ak3

(Ostalé et al., 2021)

CG6612

(Çiçek et al., 2016, Hosono et al., 2015, Cammarato et al., 2011, Ni et al., 2011.7.19, Ni et al., 2010.12.1, Keleman et al., 2009.8.5)

DAK3

(Noma, 2000.10.27)

Dak3

(Fujisawa et al., 2009)

bs12h03.y1

(Andrews et al., 2000)

Name Synonyms

ADENYLATE KINASE - 3

(Alonso et al., 2005)

Adenylate kinase 3

Adenylate kinase-3

(Cammarato et al., 2011, Noma et al., 2000)

Secondary FlyBase IDs

FBgn0037854

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 61 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

41318

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q9VGU6

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Q9VGU6

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q9VGU6

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0042094

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

41318/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0042094

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0042094

FlyMine - An integrated database for Drosophila genomics

FBgn0042094

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG6612

MARRVEL_MODEL - MARRVEL (model organism gene)

41318

Linkouts

BioGRID - A database of protein and genetic interactions.

66461

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0042094

DroID - A comprehensive database of gene and protein interactions.

FBgn0042094

DRSC - Results frm RNAi screens

FBgn0042094

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0042094

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0042094

FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG6612

Flygut - An atlas of the Drosophila adult midgut

FBgn0042094

FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.

FBgn0042094

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC009374

KEGG Metabolic Pathways - A collection of manually drawn metabolic pathway maps representing knowledge of molecular interaction, reaction and relation networks.

KEGG Pathways - A collection of manually drawn pathway maps representing knowledge of molecular interaction, reaction and relation networks.

MIST (protein-protein) - An integrated Molecular Interaction Database

41318

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Reactome Metabolic Pathways - An open-source, open access, manually curated and peer-reviewed metabolic pathway database.

Interconversion of nucleotide di- and triphosphates

References (50)

The following external sites may use different assemblies or annotations than FlyBase.

4.69

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