FlyBase Gene Report: Dmel\Hinfp

General Information

Symbol

Dmel\Hinfp

Species

D. melanogaster

Name

Histone H4 transcription factor

Annotation Symbol

CG17829

Feature Type

protein_coding_gene

FlyBase ID

FBgn0025635

Gene Model Status

Current

Stock Availability

12 publicly available

Gene Summary

Contribute a Gene Snapshot for this gene.

All Summaries

Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

EG:115C2.6

Key Links

Genomic Location

Cytogenetic map

1B12-1B12

Sequence location

X:625,542..628,016 [+]

Recombination map

1-0

RefSeq locus

NC_004354 REGION:625542..628016

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

Gene Ontology (GO) Annotations (9 terms)

Molecular Function (5 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (5 terms)

CV Term

Evidence

References

enables DNA-binding transcription activator activity, RNA polymerase II-specific

inferred from sequence or structural similarity with UniProtKB:Q9BQA5

(Gene Ontology Curators, 2002-)

enables DNA-binding transcription factor activity, RNA polymerase II-specific

inferred from biological aspect of ancestor with PANTHER:PTN001227065

(GO Reference Genome Project, 2011-)

enables DNA-binding transcription factor activity

inferred from sequence or structural similarity with UniProtKB:Q9BQA5

(Gene Ontology Curators, 2002-)

enables RNA polymerase II cis-regulatory region sequence-specific DNA binding

inferred from biological aspect of ancestor with PANTHER:PTN001227065

(GO Reference Genome Project, 2011-)

enables transcription cis-regulatory region binding

inferred from sequence or structural similarity with UniProtKB:Q9BQA5

(Gene Ontology Curators, 2002-)

Biological Process (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

involved_in positive regulation of transcription by RNA polymerase II

inferred from mutant phenotype

(Nirala et al., 2021)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

involved_in regulation of DNA-templated transcription

inferred from sequence or structural similarity with UniProtKB:Q9BQA5

(Gene Ontology Curators, 2002-)

involved_in regulation of transcription by RNA polymerase II

inferred from biological aspect of ancestor with PANTHER:PTN001227065

(GO Reference Genome Project, 2011-)

Cellular Component (1 term)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

located_in nucleus

inferred from sequence or structural similarity with UniProtKB:Q9BQA5

(Gene Ontology Curators, 2002-)

Gene Group (FlyBase)

C2H2 ZINC FINGER TRANSCRIPTION FACTORS

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

C2H2 ZINC FINGER TRANSCRIPTION FACTORS -: Zinc finger C2H2 transcription factors are sequence-specific DNA binding proteins that regulate transcription. They possess DNA-binding domains that are formed from repeated Cys₂His₂ zinc finger motifs. (Adapted from PMID:1835093, FBrf0220103 and FBrf0155739).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\Hinfp for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry O77260)

If you don't see a structure in the viewer, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Experimentally Determined Structures

Crossreferences

Comments on Gene Model

Gene model reviewed during 5.50

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.55

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Hinfp-RA

FBtr0070116

NM_143797

2256

467

Hinfp-RB

FBtr0070118

NM_166851

2197

467

Hinfp-RC

FBtr0070117

NM_166852

2199

448

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

UniProt

RefSeq ID

GenBank

Hinfp-PA

FBpp0070111

54.2

467

7.61

FBpp0070113

54.2

467

7.61

FBpp0070112

51.7

448

7.68

Q9W5E6

NP_726685

AAF45530

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

467 aa isoforms: Hinfp-PA, Hinfp-PB

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Hinfp using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CG17829_1

Linkouts

Expression Data

Testis-specificity index

The testis specificity index was calculated from modENCODE tissue expression data by Vedelek et al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).

-0.17

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

organism

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

organism

(Fisher et al., 2012)

embryonic stage 7 -- 8

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 9 -- 10

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 11 -- 12

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 13 -- 16

gonad

(Fisher et al., 2012)

organism | faint | ubiquitous

(Fisher et al., 2012)

organism | ubiquitous

(Fisher et al., 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

JBrowse - Visual display of RNA-Seq signals

View Dmel\Hinfp in JBrowse

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Hinfp

View exonic expression by tissue for Dmel\Hinfp

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0025635

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

47718/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0025635

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0025635

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0025635

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG17829

Flygut - An atlas of the Drosophila adult midgut

FBgn0025635

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\Hinfp

Stages(s) 1-3
Stages(s) 4-6
Stages(s) 9-10
Stages(s) 11-12
Stages(s) 13-16

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 6 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 11 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Hinfp

Transgenic constructs containing regulatory region of Hinfp

Aberrations (Deficiencies and Duplications) ( 0 )

Inferred from experimentation ( 0 )

Inferred from location ( 0 )

Variants

Variant Molecular Consequences

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal - all die before end of P-stage

partially lethal - majority die

Hinfp¹

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

Hinfp^GD9474

viable, with Scer\GAL4^Mef2.PR

Hinfp^GD9474

viable, with Scer\GAL4^pnr-MD237

Hinfp^GD9474

viable, with Scer\GAL4^tin.CΔ4

Hinfp^GD9474

Other Phenotypes

Allele

abnormal DNA repair | adult stage

Hinfp²

abnormal DNA repair | adult stage | somatic clone

Hinfp²

abnormal DNA repair | larval stage

Hinfp²

abnormal DNA repair | pupal stage

abnormal locomotor behavior | adult stage, with Scer\GAL4^elav.PU

Hinfp^KK108532

decreased occurrence of cell division | adult stage, with Scer\GAL4^NP5130

decreased occurrence of cell division | larval stage

decreased occurrence of cell division | pupal stage

decreased size | pupal stage

Hinfp^B

increased size | adult stage | somatic clone

majority die during P-stage

short lived, with Scer\GAL4^elav.PU

Hinfp^KK108532

Phenotype manifest in

Allele

adult gut

Hinfp²

adult gut, with Scer\GAL4^NP5130

adult midgut | somatic clone

embryonic/larval midgut | larval stage

embryonic/larval salivary gland | larval stage

Hinfp²

follicle cell | somatic clone

Hinfp²

Malpighian tubule | pupal stage

Hinfp^B

midgut | pupal stage

Hinfp²

testis | pupal stage

Hinfp^B

wing disc | larval stage

Hinfp²

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Homo sapiens (Human) (57)

Hsap\HINFP

13 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Hsap\ZFP3

1 of 14

Hsap\ZFX

1 of 14

Yes

Hsap\ZFY

1 of 14

Hsap\ZIM3

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Hsap\ZNF350

1 of 14

Hsap\ZNF384

1 of 14

Hsap\ZNF416

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Hsap\ZNF624

1 of 14

Hsap\ZNF628

1 of 14

Hsap\ZNF668

1 of 14

Yes

Hsap\ZNF696

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Model Organism Orthologs (via DIOPT v9.1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Rattus norvegicus (Norway rat) (10)

Rnor\Hinfp

12 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Rnor\Zfp523

1 of 14

Yes

Rnor\Zfp846

1 of 14

Yes

Mus musculus (laboratory mouse) (14)

Mmus\Hinfp

12 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Mmus\Zfp628

1 of 14

Yes

Mmus\Zfp846

1 of 14

Mmus\Zfp934

1 of 14

Mmus\Zfp974

1 of 14

Xenopus tropicalis (Western clawed frog) (18)

Xtro\hinfp

8 of 13

Yes

Xtro\XB996620

6 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Xtro\znf208

1 of 13

Xtro\znf408

1 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Yes

Danio rerio (Zebrafish) (43)

Drer\hinfp

13 of 14

Yes

Drer\zgc:112083

10 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Drer\LOC110437725

1 of 14

Yes

Drer\LOC110437786

1 of 14

Yes

Drer\LOC110437814

1 of 14

Yes

Drer\LOC110439430

1 of 14

Drer\LOC110439525

1 of 14

Drer\prdm9

1 of 14

Drer\si:cabz01032454.3

1 of 14

Drer\si:cabz01054394.6

1 of 14

Yes

Drer\si:cabz01069020.1

1 of 14

Drer\si:cabz01069022.1

1 of 14

Yes

Drer\si:ch73-367f21.4

1 of 14

Drer\si:ch73-367f21.6

1 of 14

Drer\si:ch211-142b24.6

1 of 14

Yes

Drer\si:ch211-222k6.1

1 of 14

Drer\si:ch1073-127d16.1

1 of 14

Drer\si:dkey-33c14.6

1 of 14

Drer\si:dkey-122c11.8

1 of 14

Drer\si:dkey-156n14.3

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Drer\znf995

1 of 14

Drer\znf1014

1 of 14

Yes

1 of 14

1 of 14

1 of 14

1 of 14

1 of 14

Yes

Caenorhabditis elegans (Nematode, roundworm) (4)

Cele\hinf-1

12 of 14

Yes

Cele\F56D1.1

1 of 14

Yes

Cele\Y111B2A.10

1 of 14

Cele\ztf-2

1 of 14

Yes

Anopheles gambiae (African malaria mosquito) (30)

Agam\AgaP_AGAP002920

10 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Yes

Agam\AgaP_AGAP008795

1 of 12

Yes

Agam\AgaP_AGAP008796

1 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

Yes

Agam\AgaP_AGAP010926

1 of 12

Agam\AgaP_AGAP011181

1 of 12

Agam\AgaP_AGAP011403

1 of 12

Yes

Agam\AgaP_AGAP011404

1 of 12

Yes

Agam\AgaP_AGAP011405

1 of 12

Agam\AgaP_AGAP011408

1 of 12

Yes

Agam\AgaP_AGAP011409

1 of 12

Yes

Agam\AgaP_AGAP012007

1 of 12

Yes

Agam\AgaP_AGAP012027

1 of 12

Yes

Agam\AgaP_AGAP012110

1 of 12

Agam\AgaP_AGAP012546

1 of 12

Yes

Agam\AgaP_AGAP012704

1 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

Yes

Agam\AgaP_AGAP012834

1 of 12

Yes

Arabidopsis thaliana (thale-cress) (0)

Saccharomyces cerevisiae (Brewer's yeast) (1)

Scer\PZF1

1 of 13

Yes

Schizosaccharomyces pombe (Fission yeast) (0)

Escherichia coli (enterobacterium) (0)

Other Organism Orthologs (via OrthoDB)

Data provided directly from OrthoDB:Hinfp. Refer to their site for version information.

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v9.1)

Gene Symbol

Score

Source

Alignment

Drosophila melanogaster (Fruit fly) (12)

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

kmg

1 of 13

wek

1 of 13

zfh1

1 of 13

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v9.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

HINFP; histone H4 transcription factor

13 of 14

607099

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Show neighbor-neighbor interactions:

Off

Show/hide secondary interactors
(data from AllianceMine provided by esyN)

Select Layout:

Force Directed

Circle

Concentric

Legend:

Protein

RNA

Selected Interactor(s)

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

MIST Molecular Interaction Search Tool

View in MIST tool (external link)

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

Hinfp - Alh

two hybrid array

(Shokri et al., 2019)

Hinfp - CG2889

two hybrid array

(Shokri et al., 2019)

Hinfp - CG6276

two hybrid array

(Shokri et al., 2019)

Hinfp - Gsc

two hybrid

(Hu et al., 2017.6.13)

Hinfp - Lim1

two hybrid

(Hu et al., 2017.6.13)

Hinfp - Ravus

two hybrid array

(Shokri et al., 2019)

Hinfp - Rel

two hybrid array

(Shokri et al., 2019)

Hinfp - Ubx

bimolecular fluorescence complementation, fluorescence microscopy

(Bischof et al., 2018)

Hinfp - abd-A

bimolecular fluorescence complementation, fluorescence microscopy

(Bischof et al., 2018)

Hinfp - dysf

two hybrid array

(Shokri et al., 2019)

Hinfp - lms

two hybrid

(Hu et al., 2017.6.13)

Hinfp - sim

two hybrid array

(Shokri et al., 2019)

Hinfp - trh

two hybrid array

(Shokri et al., 2019)

Summary of Genetic Interactions

esyN Network Diagram

Show/hide secondary interactors
(data from AllianceMine provided by esyN)

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser View in MIST tool (external link)

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Hinfp

suppressible

His1:CG33864

(Nirala et al., 2021)

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Ras85D

enhanceable

Hinfp

(Nirala et al., 2021)

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

70890

DroID - A comprehensive database of gene and protein interactions.

FBgn0025635

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

1-0

Cytogenetic map

1B12-1B12

Sequence location

X:625,542..628,016 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

1B12-1B12

Limits computationally determined from genome sequence between P{EP}svr^EP356&P{EP}arg^EP452 and P{EP}Dredd^EP1412&P{EP}Suv4-20^EP1216a

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

1-0

(FlyBase, 2016)

1-0.0

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (12)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

42792

y¹ v¹; P{TRiP.GL01162}attP2

44104

y¹ v¹; P{TRiP.HMS02824}attP40

81264

y¹ w^*; P{Hinfp-GFP.FPTB}attP40

78923

y¹ TI{CRIMIC.TG4.1}Hinfp^{CR00481-TG4.1} w^*

91560

y^* Hinfp⁷²⁴ w¹¹¹⁸ P{ey-FLP.N}2 P{neoFRT}19A/FM0; P{PRE.Scr-PS1}Q1

57074

y¹ Hinfp^B w^* P{neoFRT}19A/FM7c, P{GAL4-Kr.C}DC1, P{UAS-GFP.S65T}DC5, sn⁺

FlyORF

F003251

M{UAS-Hinfp.ORF-CC}ZH-21F

F000019

M{UAS-Hinfp.ORF.3xHA.GW}ZH-86Fb

NIG-Fly

HMS02824

y¹ v¹; P{TRiP.HMS02824}attP40/CyO

VDRC

v110592

P{KK108532}VIE-260B

v41659

w¹¹¹⁸; P{GD9474}v41659

v341180

P{hsFLP}1, y¹ w¹¹¹⁸; P{HD_CFD00205}attP40/CyO-GFP

Genomic Clones (19)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (45)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see JBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

DPiM_RE36568

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0025635

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0025635

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Cell Line Information

Publicly Available Cell Lines

Other Stable Cell Lines

Other Comments

Relationship to Other Genes

Source for database merge of

Source for merge of: EG:115C2.6 CG17829

(Bayraktaroglu, 2000.4.12)

Additional comments

Nomenclature History

Source for database identify of

Source for identity of: Hinfp CG17829

(Nirala et al., 2021)

Nomenclature comments

Etymology

Named 'Hinfp' after the mammalian ortholog.

(Nirala et al., 2021)

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

CG17829

(Nirala et al., 2021, Graves et al., 2020, Kennison, 2020.10.22, Shokri et al., 2019, Bischof et al., 2018, Gene Disruption Project members, 2018-, Hu et al., 2017.6.13, model organism Encyclopedia of Regulatory Network (modERN) Project, 2015-, Schertel et al., 2015, Yamamoto et al., 2013-, Japanese National Institute of Genetics, 2012.5.21, Ni et al., 2010.12.1, Keleman et al., 2009.8.5, Lebo et al., 2009)

EG:115C2.6

(Giot et al., 2003, Benos et al., 2001)

Hinfp

Name Synonyms

Histone H4 transcription factor

Secondary FlyBase IDs

FBgn0029530

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (0)

Result

Result Type

Title

External Crossreferences and Linkouts ( 39 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

47718

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

O77260

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

O77260

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0025635

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

47718/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0025635

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0025635

FlyMine - An integrated database for Drosophila genomics

FBgn0025635

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

dme:Dmel_CG17829

MARRVEL_MODEL - MARRVEL (model organism gene)

47718

Linkouts

BioGRID - A database of protein and genetic interactions.

70890

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0025635

DroID - A comprehensive database of gene and protein interactions.

FBgn0025635

DRSC - Results frm RNAi screens

FBgn0025635

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CG17829_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0025635

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0025635

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG17829

Flygut - An atlas of the Drosophila adult midgut

FBgn0025635

References (44)

The following external sites may use different assemblies or annotations than FlyBase.

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