FB2024_03 , released June 25, 2024
Allele: Atha\CIB1CIBN(ΔNLS).UAS.LARIAT
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General Information
Symbol
Atha\CIB1CIBN(ΔNLS).UAS.LARIAT
Species
A. thaliana
Name
FlyBase ID
FBal0365824
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Also Known As
UAS-LARIAT
Transgenic product class
Nature of the Allele
Transgenic product class
Progenitor genotype
Carried in construct
Cytology
Description

UASt regulatory sequences drive expression of a VHH(GFP4) nanobody-containing 'LARIAT' (Light-activated reversible inhibition by assembled trap) system. LARIAT is a two component system that can be used to reversibly inhibit protein function by sequestering target proteins into large, optically assembled protein complexes in vivo (for more details, see PMID:24793453). In this case, proteins tagged with GFP (or another related fluorescent tag that is bound by VHH(GFP4)) can be reversibly sequestered and inhibited. The two components are expressed as a single mRNA which gives rise to two distinct proteins due to the presence of a P2A peptide between the two coding sequence (this also ensures that both components are present in equal amounts). The first open reading frame in P{UAS-LARIAT.VHH(GFP)} (represented in FlyBase by Zzzz\VHHGFP4.UAS.LARIAT) encodes the VHH(GFP4) nanobody tagged with SNAP-tag(Unk) and with CRY2(PHR). The second open reading frame in P{UAS-LARIAT.VHH(GFP)} (represented in FlyBase by Atha\CIB1CIBN(ΔNLS).UAS.LARIAT) encodes the Tag:MP(AV) multimerization domain fused to CIBN(ΔNLS). When stimulated by blue light, the CRY2(PHR) portion of the Zzzz\VHHGFP4.UAS.LARIAT component simultaneously oligomerizes and binds to the CIBN(ΔNLS) portion of the Atha\CIB1CIBN(ΔNLS).UAS.LARIAT component. This results in large protein clusters, by promoting interconnection amongst the Atha\CIB1CIBN(ΔNLS).UAS.LARIAT multimers, while the presence of the VHH(GFP4) nanobody in the Zzzz\VHHGFP4.UAS.LARIAT component means that GFP-tagged proteins are sequestered and trapped in the protein cluster.

Allele components
Component
Use(s)
Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
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Models Based on Experimental Evidence ( 0 )
Disease
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Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference
External Data
Interactions
Show genetic interaction network for Enhancers & Suppressors
Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
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Complementation and Rescue Data
Comments
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Mutant
Wild-type
Stocks (0)
Notes on Origin
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External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
Atha\CIB1CIBN(ΔNLS).UAS.LARIAT
Name Synonyms
Secondary FlyBase IDs
    References (5)