FB2024_03 , released June 25, 2024
Allele: Dmel\ShawRNAi.Sym.UAS.cHa
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General Information
Symbol
Dmel\ShawRNAi.Sym.UAS.cHa
Species
D. melanogaster
Name
FlyBase ID
FBal0245247
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Transgenic product class
Nature of the Allele
Transgenic product class
Progenitor genotype
Carried in construct
Cytology
Description

Sense-antisense transcription (driven by two convergent arrays of UAS sequence) of a 720 bp fragment of the 3' end of Shaw (starting at nucleotide 881 in exon 8 through to the end of the gene including approximately 110bp of 3' untranslated sequence) results in double stranded RNA (dsRNA) expression.

Allele components
Component
Use(s)
Encoded product / tool
Mutations Mapped to the Genome
Curation Data
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Location
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Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
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Marker for
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Reporter construct used in assay
Human Disease Associations
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Disease
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Disease
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Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Flies expressing ShawdsRNA.Sym.Scer\UAS.cHa under the control of Scer\GAL4tim.PE exhibit short-period locomotor rhythms in constant dim white light, in contrast to control flies which largely show arrhythmic behavior in these conditions. These flies do not exhibit any difference in locomotor rhythms when kept in constant darkness, as compared to controls.

Flies expressing ShawdsRNA.Sym.Scer\UAS.cHa under the control of Scer\GAL4qsm-NP6258 exhibit locomotor rhythms in constant dim white light, in contrast to control flies which largely show arrhythmic behavior in these conditions.

The l-LNv neurons in flies expressing ShawdsRNA.Sym.Scer\UAS.cHa under the control of Scer\GAL4Pdf.PU exhibit depolarization of the nighttime (but not daytime) resting membrane potential, and an increased spontaneous firing rate during the night (but not during the day), as compared to wild type; these neurons also show a heightened response to blue light when tested during the daytime, as compared to wild type.

Expression of ShawdsRNA.Sym.Scer\UAS.cHa in all clock neurons (under the control of Scer\GAL4tim.PE) has no clear effect on locomotor rhythms in LD. The same is true when Scer\GAL80Pdf.PS is added to restrict expression.

Expression of ShawdsRNA.Sym.Scer\UAS.cHa in non-cry cells - a large fraction of the Dorsal Neurons, through Scer\GAL4tim.PE and Scer\GAL80cry.PS results in a lack of behavioural anticipation of the 'lights-on' transition in the morning, and only a marginal anticipation of the 'lights-off' transition in the evening. This abnormal behavioural pattern is most likely caused by a more central clock or clock-output defect, resulting in a drastically increased free-running period.

Reduction of Shaw expression in the DNs alone, through expression of ShawdsRNA.Sym.Scer\UAS.cHa (under the control of Scer\GAL4tim.PE and Scer\GAL80cry.PS) leads to a dramatic period lengthening of 3.5 to 4 hours.

Expression of ShawSym.Scer\UAS.cHa and Shawa.Sym.Scer\UAS.cHa in all clock neurons (under the control of Scer\GAL4tim.PE) has no clear effect on locomotor rhythms in LD. The same is true when Scer\GAL80Pdf.PS is added to restrict expression.

Expression of ShawSym.Scer\UAS.cHa and Shawa.Sym.Scer\UAS.cHa in non-cry cells - a large fraction of the Dorsal Neurons, through Scer\GAL4tim.PE and Scer\GAL80cry.PS results in a lack of behavioural anticipation of the 'lights-on' transition in the morning, and only a marginal anticipation of the 'lights-off' transition in the evening. This abnormal behavioural pattern is most likely caused by a more central clock or clock-output defect, resulting in a drastically increased free-running period.

Reduction of Shaw expression in the DNs alone, through expression of ShawSym.Scer\UAS.cHa and Shawa.Sym.Scer\UAS.cHa (under the control of Scer\GAL4tim.PE and Scer\GAL80cry.PS) leads to a dramatic period lengthening of 3.5 to 4 hours.

External Data
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Phenotypic Class
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Complementation and Rescue Data
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Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (4)
Reported As
Symbol Synonym
ShawRNAi.Sym.UAS.cHa
ShawSym.Scer\UAS.cHa
ShawdsRNA.Sym.Scer\UAS.cHa
ShawdsRNA.Sym.UAS.cHa
Name Synonyms
Secondary FlyBase IDs
  • FBal0245248
References (3)