FB2024_03 , released June 25, 2024
Allele: Dmel\otuPΔ5
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General Information
Symbol
Dmel\otuPΔ5
Species
D. melanogaster
Name
FlyBase ID
FBal0032355
Feature type
allele
Associated gene
Associated Insertion(s)
Carried in Construct
Key Links
Genomic Maps

Nature of the Allele
Cytology
Description

otuPΔ2 and otuPΔ5 are identical at the molecular level: otu sequences originating at the site of the parental P element insertion and extending to +673bp (in the second exon, just downstream of the translation start site) from the start of transcription are excised. However a second in-frame translation start codon is found one codon later, so the possible product differs from wild type only in the first two amino acids. The possibility of base substitutions in other parts of the protein has not been ruled out.

otuPΔ2 and otuPΔ5 have identical sequences. 16bp of the upstream P insert inverted repeat remains, followed by a 13bp stretch of unknown origin. The downstream end point of the deletion is at +674 in the otu gene, thus the major transcriptional start site and the entire transcribed leader region, including the translational start codon is gone. Upstream regulatory sequences and the minor transcriptional start sites are intact, and an alternative in-frame translational start codon (the third codon of the wild-type gene) is present.

Mutations Mapped to the Genome
Curation Data
Type
Location
Additional Notes
References
Comment:

673 bp deletion associated with the imprecise excision of P{}otu20.

Variant Molecular Consequences
Associated Sequence Data
DNA sequence
Protein sequence
 
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Human Disease Associations
Disease Ontology (DO) Annotations
Models Based on Experimental Evidence ( 0 )
Disease
Evidence
References
Modifiers Based on Experimental Evidence ( 0 )
Disease
Interaction
References
Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
 
Disease-implicated variant(s)
 
Phenotypic Data
Phenotypic Class
Phenotype Manifest In
Detailed Description
Statement
Reference

Hypomorphic otuPΔ5 egg chambers typically reach stages 8-9, and occasionally stage 10.

Cytoplasmic dumping is blocked in homozygous egg chambers. The cytoplasmic actin cytoskeleton of nurse cells shows major disruptions, while the cortical actin appears normal.

When XY flies are transformed into pseudofemales by traHsp83.PS, otu activity is sufficient to allow XY germ cell proliferation. Frequency of agametic ovaries is higher than that of otu+/Y pseudofemales.

Large ovaries containing primarily late stage egg cysts characterized by pseudonurse cells and yolky oocytes.

External Data
Interactions
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Phenotypic Class
Phenotype Manifest In
Additional Comments
Genetic Interactions
Statement
Reference
Xenogenetic Interactions
Statement
Reference
Complementation and Rescue Data
Comments
Images (0)
Mutant
Wild-type
Stocks (1)
Notes on Origin
Discoverer
Comments
Comments

DIF class allele.

DIF class phenotype.

External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (1)
Reported As
Symbol Synonym
otuPΔ5
Name Synonyms
Secondary FlyBase IDs
    References (6)