FB2024_03 , released June 25, 2024
Aberration: Dmel\Df(3R)pydB12
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General Information
Symbol
Df(3R)pydB12
Species
D. melanogaster
Name
FlyBase ID
FBab0047471
Feature type
chromosomal_deletion
Also Known As
pydB12
Computed Breakpoints include
Features within 85B2--85B3 (Estimated cytology)
Genomic Maps
Sequence coordinates
3R:8,824,457..8,824,457 (Df(3R)pyd[B12]:bk1)
(Choi et al., 2011)
3R:8,861,709..8,861,709 (Df(3R)pyd[B12]:bk2)
(Choi et al., 2011)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
P{RS5}CG83795-HA-1806
(Choi et al., 2011)
PBac{WH}pydf05901
(Choi et al., 2011)
Mutagen
FLPase
(Choi et al., 2011)
Class of aberration (relative to wild type)
chromosomal_deletion
(Choi et al., 2011)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Transposon Insertions
Formalized genetic data
Genetic mapping information
Comments

Scer\FRT-mediated recombination between the two progenitor insertions has resulted in the deletion of the genomic sequence between them.

(Choi et al., 2011)
Comments on Cytology
Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location (2)
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 

FLP-mediated site-specific recombination between P{RS5}CG83795-HA-1806 and PBac{WH}pydf05901 generates a 37kb genomic deletion that eliminates the coding sequence of all known and predicted pyd isoforms and also deletes an adjacent locus, CG8379.

(Choi et al., 2011)
Synonyms and Secondary IDs (3)
Reported As
Symbol Synonym
Df(3R)pydB12
Df(pyd)B12
(Letizia et al., 2019)
pydB12
(Peifer et al., 2023, Choi et al., 2011)
Name Synonyms
Secondary FlyBase IDs
    References (3)