FB2024_04 , released June 25, 2024
Aberration: Dmel\Df(3R)ED5644
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General Information
Symbol
Df(3R)ED5644
Species
D. melanogaster
Name
FlyBase ID
FBab0036873
Feature type
Computed Breakpoints include

[88A4-88A4];[88C9-88C9];

Genomic Maps
Sequence coordinates
3R:14,017,903..14,017,903 (Df(3R)ED5644:bk1)
3R:14,625,709..14,625,709 (Df(3R)ED5644:bk2)
Member of large scale dataset(s)
Dfs_DrosDel_set1

A set of isogenic deficiency stocks created by FLP-induced recombination between FRT-carrying transgenic insertions; molecularly defined deletion endpoints correspond to initial location of the progenitor insertions. Initial core set of 209 isogenic deletions provides ~60% euchromatic genome coverage.

Nature of Aberration
Cytological Order
Class of aberration (relative to wild type)
Class of aberration (relative to progenitor)
Breakpoints
Causes alleles
Carries alleles
Formalized genetic data
Genetic mapping information
Comments

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

Comments on Cytology

Confirmed by 3-step PCR confirmation as shown in http://www.drosdel.org.uk/del_confirm.php

Limits of break 1 computationally determined from location of progenitor P insertion on genome sequence between P{PZ}flfl01949 and P{lacW}trxj14A6&P{PZ}trx00347 Limits of break 2 computationally determined from location of progenitor P insertion on genome sequence between P{PZ}put10460 and P{EP}CG33967EP666

Sequence Crossreferences
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

Flies heterozygous for the deletion do not show a Minute bristle phenotype.

Stocks (2)
Notes on Origin
Discoverer
 

Potential deficiency; could be generated as the recombinant product between the reduced derivatives of P{RS3}UM-8036-3 and P{RS5}5-HA-1073.

Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (4)
References (18)