FB2024_04 , released June 25, 2024
Aberration: Dmel\Df(2R)50C-38
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General Information
Symbol
Df(2R)50C-38
Species
D. melanogaster
Name
FlyBase ID
FBab0026828
Feature type
chromosomal_deletion
Computed Breakpoints include

P{CaSpeR}Cp150C;[]

Features within 50C19--50E1 (Estimated cytology)Features within 50C20--50D7
Genomic Maps
Sequence coordinates
2R:13,964,325..13,964,325 (Df(2R)50C-38:bk1)
(Flores et al., 2009.10.15)
2R:14,175,325..14,175,325 (Df(2R)50C-38:bk2)
(Flores et al., 2009.10.15)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
P{CaSpeR}CtsL150C
(Flores, 2004.1.28, Preston et al., 1996)
Mutagen
Delta2-3 transposase
(Preston et al., 1996)
Class of aberration (relative to wild type)
chromosomal_deletion
(FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_deletion
(Flores, 2004.1.28, Preston et al., 1996)
Breakpoints

50C20-50C23;50D4-50D7

(Preston et al., 1996)

P{CaSpeR}Cp150C;[]

(Flores, 2004.1.28)
Causes alleles
CtsL150C-38
(Flores, 2004.1.28)
Carries alleles
Transposon Insertions
P{CaSpeR}CtsL150C-38
(Flores, 2004.1.28)
Formalized genetic data

AGO1 << bk1 << Cp1 << pea << bk2 << l(2)00248

Genetic mapping information
Comments

Sequence coordinate is estimated.

(Flores et al., 2009.10.15)
Comments on Cytology

The deletion extends ca. 211 kb distally from the end of P{CaSpeR}Cp150C. Deletes part of Cp1, deletes all of Aats-phe, CG6704, CG18568, CG6701, CG13350, CG8067, RN-tre, CG30482, mam, CG18371, Prosap, CG13353, CG8233, pea, CG13018, CG13016, CG8257, O-fut1, Tango7, CG8323, CG18327, CG18324, CG8331, mRpS16, and part of cg.

(Flores, 2004.1.28)

Left limit of break 1 from polytene analysis (FBrf0091145) Right limit of break 1 from inclusion of Cp1 (FBrf0091145) Limits of break 2 from polytene analysis (FBrf0091145)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
DX355316
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Genes NOT Deleted / Disrupted
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
Phenotypic Data
In combination with other aberrations
NOT in combination with other aberrations

Midline glia are present in Df(2R)50C-38 mutant stage 16 embryos but appear disorganised compared to wild type.

(Zhang et al., 2011)
Stocks (1)
Notes on Origin
Discoverer
 
Balancer / Genotype Variants of the Aberration
 
Separable Components
 
Other Comments
 
Synonyms and Secondary IDs (2)
Reported As
Symbol Synonym
38
(Johnson-Schlitz and Engels, 2006)
Df(2R)50C-38
(Talley et al., 2021, D'Brot et al., 2013, Kugler et al., 2013, Zhang et al., 2011)
Name Synonyms
Secondary FlyBase IDs
    References (14)