FlyBase Aberration Report: Dmel\Df(3R)red3l

General Information

Symbol

Df(3R)red3l

Species

D. melanogaster

Name

Deficiency (3R) red Malpighian tubules

FlyBase ID

FBab0002879

Feature type

chromosomal_deletion

Also Known As

Df(3R)red31, Df(3R)red³¹, Df(3R)red^3l, Df(3R)red-31

Computed Breakpoints include

87F12-87F14;88C2

Features within 87F12--88C2

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Gonzalez-Reyes et al., 1997, Price et al., 1997, Duffy et al., 1996, Harbecke and Lengyel, 1995, Pauli et al., 1995, Green et al., 1990, Capdevila and Garcia-Bellido, 1981, Hall and Kankel, 1976)

Breakpoints

87F12-87F14;88C1-88C3

(Price et al., 1997, Harbecke and Lengyel, 1995, Pauli et al., 1995, Green et al., 1990, Hall and Kankel, 1976)

87F15;88C1-88C3

(Capdevila and Garcia-Bellido, 1981)

87F12-87F14;88C1-88C2

(Duffy et al., 1996)

87F2-87F14;88C1-88C3

(Gonzalez-Reyes et al., 1997)

Causes alleles

Carries alleles

tefu^red31

(Oikemus et al., 2004)

Transposon Insertions

Formalized genetic data

l(3)02946 << bk1 << Dip-B << pr-set7 << bk2 << l(3)03471

Genetic mapping information

Comments

Comments on Cytology

Ref: FBrf0028767.

(Capdevila and Garcia-Bellido, 1981)

Limits of break 1 from polytene analysis (FBrf0028767) Left limit of break 2 from inclusion of cv-c (FBrf0051995) Right limit of break 2 from polytene analysis (FBrf0086390)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

B52

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

cv-c

(Spradling et al., 1999, BDGP Project Members, 1994-1999, Green et al., 1990)

Dip-B

(Jarman and Collett, 1998)

ems

(Jarman and Collett, 1998, Harbecke and Lengyel, 1995, Dalton et al., 1989, Tearle and Nusslein-Volhard, 1987, Jurgens et al., 1984)

l(3)88Ac

(Jarman and Collett, 1998)

l(3)88Ad

(Jarman and Collett, 1998)

l(3)j1E7

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

l(3)L5340

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

Orc2

(Jarman and Collett, 1998)

Polr2B

(Jarman and Collett, 1998)

rdx

(Spradling et al., 1999, Jarman and Collett, 1998, BDGP Project Members, 1994-1999)

red

(Green et al., 1990)

Set8

(Fang et al., 2002, Nishioka et al., 2002, Spradling et al., 1999, BDGP Project Members, 1994-1999)

spn-B

(Gonzalez-Reyes et al., 1997, Tearle and Nusslein-Volhard, 1987)

su(Hw)

(Jarman and Collett, 1998)

tefu

(Queiroz-Machado et al., 2001)

trx

(Spradling et al., 1999, Netter et al., 1998, BDGP Project Members, 1994-1999, Capdevila and Garcia-Bellido, 1981)

urd

(Netter et al., 1998)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Ace

(Hall and Kankel, 1976)

B52

(Peng and Mount, 1995)

E(Egfr)C12

(Price et al., 1997)

E(var)87F

(Reuter et al., 1987)

flfl

(Spradling et al., 1999)

Hrb87F

(Peng and Mount, 1995)

jvl

(Green et al., 1990)

l(3)01949

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

l(3)02946

(BDGP Project Members, 1994-1999)

l(3)03471

(BDGP Project Members, 1994-1999)

l(3)03608

(BDGP Project Members, 1994-1999)

l(3)04449

(BDGP Project Members, 1994-1999)

l(3)neo39

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

Pp1-87B

(Reuter et al., 1987)

put

(Spradling et al., 1999, BDGP Project Members, 1994-1999)

(Green et al., 1990)

sqd

(Spradling et al., 1999, Peng and Mount, 1995, BDGP Project Members, 1994-1999)

stumps

(Imam et al., 1999)

Su(var)3-7

(Reuter et al., 1987)

Su(var)3-13

(Reuter et al., 1987)

Su(var)3-14

(Reuter et al., 1987)

wrl

(Green et al., 1990, Fuller, 1986)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Phenotypic Data

In combination with other aberrations

Aberration fails to complement Df(3R)urd, Df(3R)293γ5, Df(3R)293γ7 and Df(3R)red-P52 and complements Df(3R)l26c.

(Jarman and Collett, 1998)

No effect on In(1)w^m4h position-effect variegation.

(Wustmann et al., 1989)

NOT in combination with other aberrations

The Df(3R)red3l chromosome does not act as a dominant suppressor of telomeric silencing (assayed using the effect of the chromosome on the eye colour phenotype of flies carrying "P{w^var}KR3-2", a stable "brown-red" variant of the P{3'WP-2,w^var}2Lt insertion).

(Mason et al., 2004)

Strong enhancer of the eye pigment phenotype of w^T81.

(Netter et al., 1998)

Dominantly causes tergite defects in less than 50% of run³ heterozygotes.

(Duffy et al., 1996)

Homozygous embryos do not complete head involution, dorsal closure or tracheal formation.

(Harbecke and Lengyel, 1995)

Heterozygosity for this deletion has no effect on the mutant ovarian phenotype of ovo^D2.

(Pauli et al., 1995)

Heterozygotes with wrl¹ are fertile.

(Green et al., 1990)

Heterozygotes sometimes have transformations typical of bithorax or postbithorax mutants.

(Capdevila and Garcia-Bellido, 1981)

Df(3R)red/+ progeny of Df(1)C128/+ females show a high frequency of homeotic transformations (Gans et al., 1980).

Stocks (2)

Bloomington

1917

Df(3R)red3l/MKRS

Kyoto

106575

Df(3R)red3l/TM6B, Tb¹

Notes on Origin

Discoverer

Separable from: tefu^red31

(Oikemus et al., 2004)

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (11)

Reported As

Symbol Synonym

Df(3)red31

(Galindo et al., 2007)

Df(3)red³¹

(Hall, 1986)

Df(3R)red-31

(Jarman and Collett, 1998, Netter et al., 1998, Tearle and Nusslein-Volhard, 1987)

Df(3R)red31

(Sakaguchi and Steward, 2007, Zheng et al., 2007, Karachentsev et al., 2005, Mason et al., 2004, Oikemus et al., 2004, Kim et al., 2003, Fang et al., 2002, Nishioka et al., 2002, Ashton et al., 2001, Queiroz-Machado et al., 2001, Price et al., 1997, Harbecke and Lengyel, 1995, Dalton et al., 1989)

Df(3R)red3I

(Dalton et al., 1989)

Df(3R)red3l

(Minakhina and Steward, 2006, Neuburger et al., 2006)

Df(3R)red³¹

(Gonzalez-Reyes et al., 1997, Hiraizumi et al., 1992, Wustmann et al., 1989, Fuller, 1986, Jurgens et al., 1984, Capdevila and Garcia-Bellido, 1981)

Df(3R)red^3L

(Imam et al., 1999, Reuter et al., 1987)

Df(3R)red^3l

(Imam et al., 1999, Hall and Kankel, 1976)

red31

(Yamaguchi et al., 2001)

Name Synonyms

Deficiency (3R) red Malpighian tubules

Secondary FlyBase IDs

References (42)

Report Sections