FlyBase Aberration Report: Dmel\Df(3R)Scx4

General Information

Symbol

Df(3R)Scx4

Species

D. melanogaster

Name

FlyBase ID

FBab0002648

Feature type

chromosomal_deletion

Also Known As

Df(3R)Scx^w+Rx4, Df(3R)Scx⁴

Computed Breakpoints include

84B1;84D3-84D4

Features within 84B1--84D4

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Scr^W

(Hazelrigg and Kaufman, 1983)

In(3R)Scr^W

(Scott et al., 1983)

Mutagen

X ray

(Pattatucci et al., 1991, Agnel et al., 1989, Hazelrigg and Kaufman, 1983, Scott et al., 1983)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Hutchens et al., 1997, Russell et al., 1996, Spackman et al., 1994, Baker et al., 1991, Pattatucci et al., 1991, Agnel et al., 1989, Cavener et al., 1986, Hazelrigg and Kaufman, 1983)

Breakpoints

84B3;84D1-84D2

(Hutchens et al., 1997, Baker et al., 1991, Pattatucci et al., 1991, Hazelrigg and Kaufman, 1983)

84B1-84B2;84D3-84D4

(Cavener et al., 1986)

84B;84D3-84D4

(Agnel et al., 1989)

[];84D1--84D2

(Russell et al., 1996, Spackman et al., 1994)

Causes alleles

Scr^Wrv4

(Southworth and Kennison, 2002, Hazelrigg and Kaufman, 1983)

Carries alleles

Transposon Insertions

Formalized genetic data

ftz << bk1 << Scr << rn << bk2 << Est-C

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped

(Agnel et al., 1989)

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0044420) Right limit of break 1 from inclusion of Scr (FBrf0039462) Left limit of break 2 from inclusion of rn (FBrf0044420) Right limit of break 2 from polytene analysis (FBrf0044420)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Alh

(Kaufman et al., 1990, Cavener et al., 1986)

Antp

(Kaufman et al., 1990, Agnel et al., 1989, Hazelrigg and Kaufman, 1983, Scott et al., 1983)

gfzf

(Cavener et al., 1986)

Gld

(Cavener et al., 1986)

hat

(Cavener et al., 1986)

l(3)84Bb

(Kaufman et al., 1990, Cavener et al., 1986)

l(3)84Bc

(Cavener et al., 1986)

l(3)84Cb

(Cavener et al., 1986)

l(3)84Ce

(Cavener et al., 1986)

lap

(Babcock et al., 2003)

mab

(Kaufman et al., 1990, Cavener et al., 1986)

(Agnel et al., 1989, Cavener et al., 1986)

rue

(Cavener et al., 1986)

sas

(Cavener et al., 1986)

Scr

(Hazelrigg and Kaufman, 1983)

ted

(Cavener et al., 1986)

αTub84B

(Hutchens et al., 1997, Kaufman et al., 1990, Hays et al., 1989, Cavener et al., 1986)

Partially deleted / disrupted

Molecular Data

Completely deleted

Mlp84B

(Clark et al., 2007)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In this case, the "Export to Hitlist" button at left will also be disabled.

Related Comments

Df(3R)Scx4 deletes the "roe" (roughened eye) function of the rn locus.

(Agnel et al., 1989)

Affects both the "roe" (roughened eye) and "rn" (rotund) functions of the rn locus.

(Cavener et al., 1986)

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Heterozygotes are male fertile.

(Hoyle et al., 2001)

Hemizygous males are fertile but with reduced fecundity, the total testis tubulin pool is approximately half that of wild type. Spermatid nuclei are normally shaped but many spermatids are not properly aligned at the tip of the developing bundle.

(Hutchens et al., 1997)

Homozygous lethal.

(Scott et al., 1983)

homozygous lethal

Stocks (2)

Bloomington

2009

Df(3R)Scx4, Scr^Wrv4 red¹ e¹/TM3, Sb¹

Kyoto

106626

Df(3R)Scx4, Scr^Wrv4 red¹ e¹/TM3, Sb¹

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (11)

Reported As

Symbol Synonym

Df(3R)Scx-W+R4

Df(3R)Scx4

(Hueston et al., 2016, Clark et al., 2007)

Df(3R)Scx⁴

(Hoyle et al., 2001, Hutchens et al., 1997)

Df(3R)Scx^W+RX4

(Brand and Campos-Ortega, 1990, Agnel et al., 1989, Hays et al., 1989, Cavener et al., 1986, Hazelrigg and Kaufman, 1983, Scott et al., 1983)

Df(3R)Scx^w+RX4

(Spackman et al., 1994)

Df(3R)Scx^w+Rx4

(Russell et al., 1996)

Df(3R)Scx^w+X4

(Baker and Wolfner, 1988)

Df(α84B)

(Hoyle et al., 2001)

Scr^W+RX4

(Kaufman et al., 1990)

Scx^W+R4

(Baker et al., 1991)

Scx^W+RX4

(Kaufman et al., 1990)

Name Synonyms

Secondary FlyBase IDs

References (22)

Report Sections

Open Close