FB2024_03 , released June 25, 2024
Transcript: Dmel\chk-RA
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General Information
Symbol
Dmel\chk-RA
Species
D. melanogaster
Annotation Symbol
CG3409-RA
FlyBase ID
FBtr0086140
Feature type
Associated gene
Evidence Rank
Length (nt)
5083
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 43 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
      cDNA Clones, End Sequence Only (ESTs)
      End(s) extend beyond the annotated transcript, internally consistent
      Sequence
      AACGGTCAGATGATGTTCCAATTGGAGTGCGAACGGACGTGTGGTGCTAGTGTGGTGGACTATACGACTTTTCTATATTT
      TTAAGGGCCGCGGCAGTAGAGATAGCCTATTTTTCTCGCGACAGAGCGTGTTAAGTAATCAATTGAAATCCAGCGATTGG
      GTGAATCGAAAGTTCCTCCCCGATTCCCGACTCCTGCGTGCATTTGAAGCACTTACAGCCGCGATTTCCGCACTCGGGTG
      CACTGTGCTTTTGTTTATACGACCTCCGGTCGCCCCACATTTTCTGTTGAACTTGTGCCGCCGAGCGGTGTTGTCACTGT
      CCCACCTCCCCCGCAGAAAATCGAAACTCCCGTACAGTGGGCGTGACCCAGGGCGAAGCCGATAGATAATAACTTTCCAC
      GGGAACTTGAGTGTGCGTAATATCGCCTATAAAGAGTGTTTGGCAACTTGGCGTTCTGGAGTGTCACCCGCAACCAATTC
      TAATCGTACATACATATATAAGCCAGCTGATTTGGACGTGTGCTACAGCGATTTCATCCCACTGTGCAAGACGGGCGGCA
      GAAATTCATAAAACAACAGCTAACAAATTCGACGAAGAGGCATACGCAAAAGAAACGAAAGAGAGAGCGAGCTTATTGTA
      TTTTTGTAATACTCGTCTGCCCAACAACTACATTTACTGTAATGTGCAGCCTATAATGTAAGATAATGCAATGACACAGG
      ACCAACTCCCAGTAATGGTTGCAATTTAGCCCAGAAGCCACGAATTCACCAACTCAGCAGAGTGATCAGCGTTTGCACTG
      AAGGCTGCTAATTGAGGACGAGGATCATAAATCATTATCTGGCGCCAGCGAGGAGGCGAGCACAGCGACAGCAGCGATTG
      AGTTGCACCACCAGAGACGAATTAATCATACGCCGCGTTGGTCGTCCCTCCGTCGATACTAAGATATACATATATACAAT
      GCCTGCGAATCCGCCTCCGCACCACGCGCCGCGCACTTGACACGGGGAGCGGCAGAGTAGCCGGAGAAGCCAGTGAGGCC
      CAGTCTTGTGTTCGATTTGTGTTTGTTATTTCTTGTTCGAGCTAGCCGGGCACGCTAGTTGGCATCGTTGGCATCGAATC
      GAAAAGTGTTTGATTTCCGCGAAAACAAAGTACCGCATGTGGCTGCCAGGGCAAAATCTGCTAGCCGGCAGCACAAACTG
      CAACAACTGCATCTGCAACTGCAACAGCAACAACAGCAACATCACCAGCAACTGCCGCCAGTTGCCGTCAATTATCGCTC
      AATATATTCTCCGTTGGCCTGTGATAAACCCCCTAACGTTCTTAATGAACGACCTTCGGTCCAAGTCATTCTATCGTGCA
      GGCAAACCAACATCTGCAGCATCCGCGTCGGGCGCGACCACCAACGCCAAGTCGTTCGACAAGGGCCAGAACAACAATCC
      CCGTACTTACAACAACAGCGGCAAGTCGAACAAGGTGTTCCTGCATTACATACCCCGCGATCCGCGCCTAAGAATTTTCA
      ACAAAACCGCCACCCTGAATAAACACTCGAATCGCACCCTGAGCGAGCTAAACATAACTGAAGATCTGTGCAATTATGGT
      GAATTGATTGGCGGTGGTGCCGAAACAGTGAAACTAGTGCCAGTGAAATCTTAAGAATATATCCGCAAAATCCGCAGATC
      ACCGAATCAATTTATTCGTTAACAAAAGTTGGCTGTTGGCGTGCGGAGAGAGCATTGCCTGGACTACGATCGGCTACGCA
      CTGCAGTTGACCAACAGAGAGAGGGAATATTTACCTACCGCCTACTTAAGAAAATTTATGCTGAAATCTAATGCAAATTG
      TGTTCACTTCCAATAATCGCTTGGACAAGAAAGTGCAAATTTTACAAACCTTTTTATAGACGTAGCTGAACCCTTTACAC
      AACAACACGATCACTGGGACTCCGACATGGCCAAGCTAGCGACGGATCCAAACGCCTCCAACAACAACAGCTGCGAGGCG
      GTTAACAACAACCACAATGGCCAGAACCAGAGCCAAAACGGAGGCGCCTCCAATTACCAGGCCCTGCCTCTTACGCCTGC
      TCCGGCCAACACGCCACTCCACAAGGCCATCAAGCACGACCTCTTCCCGGAGGTCACCTTCTGCAACCTCTCCGTAGAGG
      AGCTCGCAGATGGGGCTGGACACAGCCGTGTGGTAAGGAGCAGTGTCATCGAACTGGAGGACGGCACCATGACGTGCCTG
      ATGAACGGAAATGGGCAGGTGAAGCGTCGCAAACGCCTGATCTCGAACGAGTCCGGCGACTCGATCGACTCCAGTTCCAC
      GGAGAAGAAAACGCCCAAGATGCCCGACGGTGGATATGGGTGGGTGGTGGTGTTCGCCTCTCTGGTCGTGTCCCTTATAG
      CCGACGGACTGAGCTTCTCATTTGGCCTAATAAACGTGGAACTGCTGGAATACTTCGGAGAGTCCACTTCGAAGACCGCC
      TGGATATCCTCGCTATTCTTCTCCGTGCCCCTGTTGATGGGACCCATCTGGTCCAATCTGGTGGACAAGTACGGCTGCCG
      AAAGATGACCATCCTCGGCGGAGTGGTCTCTGCCTTTGGGTTTGCTCTGTCTTCGTTTTGCAACTCGATCGAGATGCTCA
      TGGTGACCTTTGGTATCATTTCGGGACTGGGCCTAGGCATCGGGTATGTGACCGCGGTGGTGTCCATTGCATTCTGGTTT
      GACAAGAAGCGCACCTTTGCGACCGGCATCGGAGCATCGGGCACCGGCATCGGGACCTTTGTCTACGCCCGCCTTACTTC
      CTATCTAATCGAATCGTACGGCTGGCGCGGAGCCACTCTAATCCTTGGCGGCACCATGCTCAACGCATGCGTTTGCGGCG
      CCCTCATGCGCGATCCCGACTGGCTGATCGAGGAAAACCGTCTAGAGAGTCGATCCCAAAGCGTCACCACCTTCTCGAAC
      TCCAGTGTCTGCCTGGAGGAAATAAAAAAGCTGCTGGACACCGGCATCACAAAGGAGGCTGTGCTAGACTCGTTGGTGAC
      CAAGAACAACACGGAGGCCAACCAGCAGATTGACGATCCGTTGGACTCCGCTCTCAAGCGCTACCGCAGCGAGATCTTCC
      TGCCCACCTTCCTGAGCACTCAGGAGCTTGACAGCATCTGCGAGGTTAAGAGCCTGAGCCGACGCTCCCTACGCCACAAG
      GAGGGTGAGGAGGCGCCGTCACGAGAGAACCTGCTGTCCATGTCCTCAGGAGCAGGTGCCTATCCCCCATCGACGGCCGT
      TATAGGCTCGCCAGATGATACCCTAATGGGCGGAATAGCTCACGAGGCGGCAGAGGAAGCAAAGAAGGCCTATCTGGCCT
      CCATCGAGACGCTGTCTCCATCGGAAAAGCGCTCCACTGGTAGGACTCCCAATGGCTCGCTCCGCTCCTCGGACGAAGGC
      TACCTTACGCAGAAGCACGCCAGCTCCCGGTACTCGCTTAACGAAAACATCTTCATGGCCAAGCATACAACACCATCAAT
      CTCCAACCTAAAGGTGAATGGCCTGCGACACAATTCGGTGGACATCTTGAGCGAGGACATGCACTGCTACTACTCGAAGG
      ACGAGACCTTCGCATTGCTGGAGCCGAGCAGGCGCATCAGGCCCACCGTCATCGCCATTCCGGAACAGGAGCAGTCGGTG
      AACAGCGAGCTGGCCACCCGTCGCGCACGCCTGGACAGCATCACGGGAATCCGCCGGCTGTCGCGCTCCAAGAAGCCCAG
      CCACCACCGATCGAACCTCCGCCGCAACATCTCGATCCGGAACTCCAACTTCCTTAAGGATATGCGCATTCACCGCAACT
      CGATCCACTACCGCGGGGCCATGCTGAACACGCACCGCTACCGGCTGCGCGCCTCCTCCTGTCCCAACATCTACCGCAAC
      TCGATGACCACCATCGCCAAAGAGGAGGAAGATACCTGGTATGACAACTTTGTGGACACCATGAAGTCCATCTTTGACTT
      TTCACTCTTTCTGGACATGAAGTTCGCCCTCTTCAATCTCTCTACATTGTTTTTGTTCATTTGGTTCATTATCCCCTATC
      TGTACCTTCCCGATTACATGAAGCAATACAAGTACGACGTGAGCCAGAGTGCCGAGTTGATTTCGGATGTCGGCATTGCC
      CAAACGGTGGGCATGATAGGACTTGGCTATCTGGGGGATCTGTCCTGGATGAACATCAATATATGCTACTCGCTGTGCAT
      GCTGGTGTGCGGAGCGTCTGTGTTCTTCATGCCCCTGCTGATTACCAACTACATGGGCCTGATGGTCATGTGCGTTATTT
      TCGGATTTACGTTCGCCAGCTCCTTCTCGTTTACGCCCAGCATTCTGGTCAGTATTGTGGATCTGGACGATTTCACGTGT
      GCCTACGGTCTGGTGCTGCTGGTTCAGGGAGTTGGAATGATCGCAGGACCCCCTATTGCAGGCGTCATATACGAGTATAC
      GGGCAGATGGGATGACACCTTCTATTATGCTGGAATATTTATCGCACTCTCTGGTGTCTGTTCGTATCTGATCGAGTTCT
      GTGAAAAGAAAGCACCTAAGGAGAGTGATAGTGATGTCTTAGAGACTAAAAAAGCTCAACTTTTACACTAGGTTACTTAC
      ATTGCACTGTTGAACGCCGCAAGTAGAAGGCAACTGGAGGTACTACAAATCCGAACTGTAGCATAATAATGGACTAGCAT
      TAAATGTTAACGAGTTTCTTATGTCAAATGGTGTTGCAGCCATAAAATCAGAGCAGAATTGTAACTGAAACTAAGCCTAT
      TCCTAAGCTCTAGCCTGTAAGACTATACTTGACTTGACTAATCGTAGCTAAGTATCAATATACACCTAACATATACTTAC
      CGCACTAGGGCAATTACTAACCGCATCTTTGTCTAGACAAACTGTTCAATTTCAATCAATATCAATGCAGTGCATCACTG
      CCAGGTGCAAACGGGTCCCTCAATTGTCTTCTTTACAAAATTTAGAAAAATAGTTTTAATTGCCTTACATTTCGTACGAA
      TATTAATTAAAGGGAATACAATAAACAACAATCTATGTAACGT
      
      Other Products of this Gene
      Other Transcripts
      Name
      FlyBase ID
      Length (nt)
      FBtr0302166
      5152
      FBtr0336659
      4496
      Polypeptides
      Derived from THIS transcript
      Name
      FlyBase ID
      Length (aa)
      FBpp0085473
      894
      Derived from OTHER transcripts
      Name
      FlyBase ID
      Length (aa)
      FBpp0291376
      894
      FBpp0307642
      894
      Comments

      Transcript terminates at site supported by polyadenylated cDNA.

      Dicistronic transcript.

      transcript_exception: dicistronic_mRNA

      External Crossreferences and Linkouts ( 1 )
      Crossreferences
      RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
      Synonyms and Secondary IDs (2)
      Reported As
      Symbol Synonym
      CG3409-RA
      chk-RA
      Secondary FlyBase IDs
        References (2)