FlyBase Insertion Report: Dmel\P{GawB}sd[SG29.1]

General Information

Symbol

Dmel\P{GawB}sd^SG29.1

Species

D. melanogaster

Name

FlyBase ID

FBti0004225

Feature type

transposable_element_insertion_site

Also Known As

sd-Gal4, scalloped-Gal4, sdGAL4, SG29.1, P{GAL4}sd^SG29.1, sd::Gal4, sd^SG29.1-Gal4

Description

Inserted Element

P{GawB}

LINE ID

Affected gene(s)

Scer\GAL4, sd

Viability / fertility

viable

Associated allele(s)

Scer\GAL4^sd-SG29.1, sd^SG29.1

Stock availability

1 publicly available

Genomic Location

Chromosomal Location

X ( 13F1 )

Sequence Location

X:15,805,297..15,805,297

Target / Docking site

Genomic Maps

JBrowse

Member of Large Scale Dataset(s)

Dataset

Description

Detailed Mapping Data

Chromosome (arm)

Sequence Location

X:15,805,297..15,805,297

(Rohith and Shyamala, 2017)

Orientation

Cytological location (computed by FlyBase)

13F1 (inferred by FlyBase from sequence location)

Cytological location (reported)

13F (in situ hybridization reported)

(Shyamala and Chopra, 1999)

Insertion into Natural transposon

Comments concerning location

Sequence Data

Flanking sequence

Inserted Element

Construct

P{GawB}

Size (Kb)

11.279

Component Allele(s)

Scer\GAL4^wB

w^+mW.hs

Molecular map

Affected Gene(s)

Insertion may affect gene

Scer\GAL4

(Bejarano et al., 2012, Bejarano et al., 2012, Coléno-Costes et al., 2012, Guilgur et al., 2012, Troost et al., 2012, Becam et al., 2011, Eivers et al., 2011, Fernández et al., 2011, Mirkovic et al., 2011, Takemura and Adachi-Yamada, 2011, Deng et al., 2010, Gurudatta et al., 2010, Kugler and Nagel, 2010, Nagai et al., 2010, Tsuda et al., 2010, Deng et al., 2009, Eivers et al., 2009, Lee et al., 2009, Oh and Irvine, 2009, Rutkowski and Warren, 2009, Bachmann et al., 2008, Eid et al., 2008, González et al., 2008, Gupta et al., 2008, Hartl et al., 2008, Hartl et al., 2008, Mouchel-Vielh et al., 2008, Oh and Irvine, 2008, Seppa et al., 2008, Tyler et al., 2008, Cordero et al., 2007, Israeli et al., 2007, Kugler and Nagel, 2007, Li et al., 2007, Sasamura et al., 2007, Hyun et al., 2006, Jaekel and Klein, 2006, Koelzer and Klein, 2006, Vidal et al., 2006, Adachi-Yamada et al., 2005, Ayyub et al., 2005, Bejarano et al., 2005, Manh et al., 2005, Neubueser et al., 2005, Ronshaugen et al., 2005, Sapir et al., 2005, Kreuger et al., 2004, Weihe et al., 2004, Zeng and Verheyen, 2004, Emerald et al., 2003, Klein, 2003, Kolzer et al., 2003, Weber et al., 2003, Fitzpatrick et al., 2002, Giraldez et al., 2002, Mao et al., 2002, Nakamura et al., 2002, Okajima and Irvine, 2002, Price et al., 2002, Wu and Cohen, 2002, Ciapponi et al., 2001, Kumar et al., 2001, Lawrence et al., 2000, Munro and Freeman, 2000, Seher and Leptin, 2000, Sotillos and Campuzano, 2000, Brennan et al., 1999, Klein and Martinez Arias, 1999, Shyamala and Chopra, 1999, Klein and Martinez Arias, 1998, Klein and Martinez Arias, 1998, Crisp and Merriam, 1997, Klein et al., 1997, Milan et al., 1997, Roy et al., 1997)

(Bejarano et al., 2012, Shyamala and Chopra, 1999, Roy et al., 1997)

Variant Molecular Consequences

Phenotypic Data

Associated Allele

Phenotypic Data

Scer\GAL4^sd-SG29.1

Phenotypic Class Phenotype Manifest in Detailed Description

sd^SG29.1

Phenotypic Class Phenotype Manifest in Detailed Description

Expression Data

Reporter Expression

distribution deduced from reporter (Gal4 UAS)

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 13

embryonic/larval central nervous system

(Deng et al., 2009)

embryonic stage 13 -- 16

embryonic/larval somatic muscle cell

(Deng et al., 2009)

cardial cell

(Deng et al., 2009)

larval stage

myoblast

(Shyamala and Chopra, 1999)

third instar larval stage

wing blade | presumptive

(Shyamala and Chopra, 1999)

mesothoracic tergum | presumptive

(Shyamala and Chopra, 1999)

wing disc | dorsal

(Milan et al., 1997)

scutellum | presumptive

(Shyamala and Chopra, 1999)

wing disc | restricted

(Shyamala and Chopra, 1999)

prepupal stage P4(ii)

thoracic adult muscle precursor cell

(Roy et al., 1997)

pupal stage -- adult stage

indirect flight muscle cell

(Shyamala and Chopra, 1999)

Additional Information

Statement

Reference

Drives expression in larval myoblasts; in the parts of the wing disc that will develop into the wing blade, mesothoracic scutum, and scutellum; in the pupal wing blade; in a subset of pupal mesothoracic myoblasts; in some adult muscles including the indirect flight muscle, proboscis muscle, and cibarial dilator muscle; and in parts of the adult olfactory system and CNS, including the maxillary palpus, antennal nerve, antennal lobe glomeruli, subesophageal ganglion, and adult brain.

(FlyBase Curators, 2017)

At embryonic stage 13, reporter expression is observed in 31% of somatic muscle cells and in several cardial cells. Expression drops in late stage 16 and is observed only in some ventral somatic muscles.

(Deng et al., 2009)

Assayed at pupal stage, expression observed in T2 (mesothoracic) myoblasts; assumed to be IFM (indirect flight muscle) myoblasts.

(Roy et al., 1997)

Marker for

adult brain

(Shyamala and Chopra, 1999)

antennal nerve

(Shyamala and Chopra, 1999)

cibarial muscle cell

(Shyamala and Chopra, 1999)

indirect flight muscle cell

(Shyamala and Chopra, 1999)

myoblast

(Shyamala and Chopra, 1999)

proboscis muscle cell

(Shyamala and Chopra, 1999)

Reflects expression of

(Deng et al., 2009, Shyamala and Chopra, 1999, Milan et al., 1997)

Reporter construct used in assay

Data on Genetic Line

Line ID

Origin as a multiple insertion line

Progenitor(s) within the Genome

Related Aberration or Balancer

Aberration

Balancer

Stocks (1)

Bloomington

8609

w^* P{GawB}sd^SG29.1

External Crossreferences and Linkouts ( 0 )

Comments

The orientation of the insertion was not reported.

(Rohith and Shyamala, 2017)

Synonyms and Secondary IDs (33)

Reported As

Symbol Synonym

32B

(Lee et al., 2009)

P{GAL4}sd^SG29.1

(Mao et al., 2002, Roy et al., 1997, FlyBase, 1992-)

P{GawB}sd^SG29.1

(FlyBase, 1992-)

SD-GAL4

(Li et al., 2013)

SD-Gal4

(Deng et al., 2010, Kugler and Nagel, 2010)

SG29.1

(Shyamala and Chopra, 1999, Roy et al., 1997)

SG29.1-GAL4

(Manh et al., 2005)

Scalloped-GAL4

(Zaytseva et al., 2023, Neubueser et al., 2005)

Scalloped-Gal4

(Guilgur et al., 2012)

Sd GAL4

(Bejarano et al., 2012)

Sd-G4

(Sotillos and Campuzano, 2000)

Sd-GAL4

(Sultan et al., 2014, Nagai et al., 2010, Li et al., 2007, Milan et al., 1997)

Sd-Gal4

(Brockmann et al., 2014, Eivers et al., 2011, Deng et al., 2009, Eivers et al., 2009)

scalloped (sd)-GAL4^strong

(Takemura and Adachi-Yamada, 2011)

scalloped Gal4

(Hyun et al., 2006)

scalloped-GAL4

(Gupta et al., 2008, Hartl et al., 2008, Seher and Leptin, 2000)

scalloped-Gal4

(Fernández et al., 2014, Eivers et al., 2009, González and Busturia, 2009, Rutkowski and Warren, 2009, Seppa et al., 2008, Kugler and Nagel, 2007, Ronshaugen et al., 2005, Munro and Freeman, 2000)

scalloped-gal4

(Cordero et al., 2007)

scalloped::Gal4

(Coléno-Costes et al., 2012)

scalloped^Gal4

(Becam et al., 2011)

scallopedGal4

(Lawrence et al., 2000)

sd Gal4

(Klein, 2003)

sd(s)-GAL4

(Adachi-Yamada et al., 2005)

sd-GAL4

(Zaytseva et al., 2023, Wang et al., 2017, Yamamoto-Hino et al., 2015, Peterson and O'Connor, 2013, Takemura and Adachi-Yamada, 2011, Gurudatta et al., 2010, González et al., 2008, Gupta et al., 2008, Haley et al., 2008, Hartl et al., 2008, Sasamura et al., 2007, Mao et al., 2002)

sd-gal4

(Gracia-Latorre et al., 2022, Oh and Irvine, 2009, Oh and Irvine, 2008, Israeli et al., 2007, Vidal et al., 2006)

sd.Gal4

(Eid et al., 2008)

sd::Gal4

(Coléno-Costes et al., 2012, Mouchel-Vielh et al., 2008)

sd::gal4

(Coléno-Costes et al., 2012)

sd^Gal4

(Becam et al., 2011)

sd^SG29.1-Gal4

(Rohith and Shyamala, 2017, Ayyub et al., 2005)

sdGAL4

(Bejarano et al., 2005, Brennan et al., 1999)

sdGal4

(Troost et al., 2012, Bachmann et al., 2008, Jaekel and Klein, 2006, Koelzer and Klein, 2006, Klein and Martinez Arias, 1999)

Name Synonyms

Secondary FlyBase IDs

References (103)

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