FB2024_03 , released June 25, 2024
Clone: Dmel\HL02936
Open Close
General Information
Symbol
Dmel\HL02936
Species
D. melanogaster
Name
HL02936
FlyBase ID
FBcl0149507
Feature type
Computed gene(s)
 
Collection Status
DGC gold BDGP
Known Problems
none
FlyBase assessment
    Library
    HL_pBS_cDNA
    • HL cDNA library of D. melanogaster, iso-1 strain, adult head, pBS vector.
    Strain
      Vector
      Tissue Source
      Stage
      Tissue/Position (including subcellular localization)
      Reference
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      1,755
      NCBI
      Full Length sequence dataSequence Downloader
      GTATCGAAAGGAAATTGTGTTGATTCCAAATAAATCCGATTCCAGCGGAGATGCAGTCGCGCAGCAAGTCCGATATGAAG
      CCCATACGAAAGGAGATCCTCAATCCGGGAAACGCCTACATCGAGCTAACCCCGGGCACCAGGGTGAAGTTCCACTTTCA
      AACGCGGAGGGCCGGCGACAGTCGCATCATCGATGATAGCCGCAAGATGGAGAAGCCCATGGAGCTGGTCCTGGGGAAGA
      AGTTTAAGCTAGAGGTCTGGGAGCTGATTGTGCAGCAGATGTCCCTTAACGAAGTGGCCAAGTTCACGGTACATAAGTCG
      CTCTGCGCTCAATATCCTTTTATATCCAAGACCCTGCGGGACATTGGCAAGAAACCGGAGGAGCGACGTCACTGCTGCGG
      AATGACATTGCAGAACGAGGGCATTGGGTACACCGACCTGGATGAGCTGCTGCAAAATCCTTCCGATCTGGAGTTCATCA
      TTGAACTGTTCTCCATTGAGCTGCCCGAGCAGTACGAAAAAGAGCGCTGGCAGATGTCCGACGACGAAAAGATGCTGGCC
      ACCAGTACGCTGCGCGAACGGGGCAACAACTTCTATAAGGCCAGTCGGTTCACAGAGGCGGAGACCTGCTACCGCGAGGC
      TGTCGGAATTGTGGAGCAGCTGATGCTAAAGGAGAAGCCGCACGACGAGGAGTGGCAGGAGCTGGCGGCCATCAAGACAC
      CGCTGTTGTTGAACTACGCGCAATGTCGGTTGATCGCCGGCGACTTCTACGCTGTGATCGAGCACTGCAACGAGGTGCTC
      ACCCTGGATCCGCGCAATGTCAAGGCACTTTTTCGTCGGGCCAAGGCCCATGCGGGTGCCTGGAATCCAGCACAGGCACG
      TCGCGACTTCCTCGACGCCTTGGCCTTGGACGCCAGCCTCAAGTCGACCGTGTCTAAGGAGCTCAAGTCCATCGAGGATC
      AGCAGCAGGCACGTAACGTCCAGGATCGCATTCACATGCAGAAGCTCTTCTAGAACATAAGTTGCGTCAACGTGCTGCTC
      ATGCTGCTTGTCTATTGGAGCAGCTACCTGCAGCGCTAGCAGTACTTGTCACTACCTTCTTTTCTTTCGCTGGCCGTCAG
      CTTCGCTCATGGTCTCGTGCTGCTCTGCTCGATGGCGAACCTATTCCTCTGCTGCTGGACCCTCAAGAAGCTGCTGCGAG
      CAATGCAGGGGCTCAGCTGGTGATTTTGCGACAACATAACACAATCAACCAACTCGGTACCATACCACCTCATTTTGTGA
      GAGCTGCATTTTGGGGCACTATATGCCCATACTCATCCTCCGCCTCGATTCACATTCAACGGTGTAGGCTAAAGGGTCTA
      AATATAATGTAAATGTACCATCCAGATGCTTGTGTGGAATTGTAATCGTGTGTATATGGAATGAAAAATGTTGTTTGCGT
      AGCGTTACCAAAAATAGTAATCAAATGTTTCACATTTGTTGTCCATAGTCGTATATGTATGTTTGTATTGTATTGTATAT
      CCCTATATGCGATATTTACTCGTAGCTAGAATCTACTCTAAATCTAGACAAATTGTGTAAGAAGTAATAAATGTGCTTTT
      GACCGCTGTCTAATTGTTAATTGTAGTTGAAGACTTTATTGTTTGTATACATATATGCGGCAAGCATACGTAATAATATG
      CATTTGCATAAGAGAGAATACAGTGTATAAAATAAATATCCAAACCTTTAAATGGACAAAAAAAAAAAAAAAAAA
      
      Library Information (1)
      Library: HL_pBS_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from adult heads.

      Sample preparation

      Adult heads were collected from an isogenic y; cn bw sp (iso-1) strain.

      Protocol

      RNA from adult heads was poly(A)+ selected once. cDNA made using Stratagene ZAP-cDNA synthesis kit; oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. For clones HL01001-HL07796, cDNA directionally cloned into EcoRI/XhoI-digested Stratagene Uni-Zap XR vector, which allows in vivo excision and recircularization of pBluescript SK(+/-) plasmid.

      Comment

      The GH library is separate from the HL library. Since many of the HL clones were not full length and others lacked inserts, a new adult head library was made.

      Reported As
      Symbol Synonyms
      HL_pBS_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)