FlyBase Aberration Report: Dmel\Df(2R)247

General Information

Symbol

Df(2R)247

Species

D. melanogaster

Name

FlyBase ID

FBab0037638

Feature type

chromosomal_deletion

Computed Breakpoints include

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

P{SUPor-P}KG01086

(Myster et al., 2004, Myster and Peifer, 2003.9.11)

Mutagen

P-element activity

(Myster et al., 2004, Myster and Peifer, 2003.9.11)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Myster and Peifer, 2003.9.11)

Breakpoints

[];[]

(Myster et al., 2004, Myster and Peifer, 2003.9.11)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Genetic mapping information

Comments

FlyBase Curator comment: eIF-4B is stated to be the next gene proximal to CG42595 in FlyBase GBrowse (Release 5.29) and is therefore predicted to be deleted by Df(2R)247. The fact that this isn't the case is consistent with eIF-4B being incorrectly located to 2Rh in FlyBase - it's actually in 3Lh (see data on the CP000217 scaffold in FBrf0200204).

(Coulthard and Alm, 2010.7.21)

This deletion removes a single ribosomal protein-coding gene (though other genes are also removed).

(Marygold et al., 2007)

Comments on Cytology

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

Partially deleted / disrupted

Molecular Data

Completely deleted

CG17683

(Coulthard et al., 2010)

CG40085

(Coulthard et al., 2010)

CG40131

(Coulthard et al., 2010)

CG40133

(Coulthard et al., 2010)

CG40270

(Coulthard et al., 2010)

CG41322

(Coulthard et al., 2010)

CG41323

(Coulthard et al., 2010)

CG41363

(Coulthard et al., 2010)

CG41449

(Coulthard et al., 2010)

Gprk1

(Coulthard et al., 2010)

Haspin

(Coulthard et al., 2010)

IntS3

(Coulthard et al., 2010)

p120ctn

(Myster et al., 2004)

RNASEK

(Coulthard et al., 2010)

RpL38

(Marygold et al., 2007)

RYa

(Coulthard et al., 2010)

Stlk

(Myster et al., 2004)

uex

(Coulthard et al., 2010)

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

BubR1

(Myster et al., 2004)

CG17486

(Myster et al., 2004)

IntS3

(Myster et al., 2004)

l(2)309

(Myster et al., 2004)

l(2)NC12

(Myster et al., 2004)

l(2)NC14

(Myster et al., 2004)

l(2)NC30

(Myster et al., 2004)

l(2)NC45

(Myster et al., 2004)

l(2)NC47

(Myster et al., 2004)

l(2)NC83

(Myster et al., 2004)

l(2)NC85

(Myster et al., 2004)

l(2)NC114

(Myster et al., 2004)

l(2)NC139

(Myster et al., 2004)

l(2)NC148

(Myster et al., 2004)

l(2)NC192

(Myster et al., 2004)

Nipped-A

(Myster et al., 2004)

Nipped-B

(Myster et al., 2004)

Not3

(Myster et al., 2004)

sxc

(Myster et al., 2004)

vlc

(Myster et al., 2004)

Molecular Data

CG17883

(Coulthard et al., 2010)

CG41311

(Coulthard and Alm, 2010.7.21)

CG41592

(Coulthard et al., 2010)

eIF4B

(Coulthard and Alm, 2010.7.21)

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Flies heterozygous for the deletion show a Minute bristle phenotype.

(Marygold et al., 2007)

Stocks (1)

Bloomington

7155

w^*; Df(2R)247/CyO, P{GAL4-Kr.C}DC3, P{UAS-GFP.S65T}DC7

Notes on Origin

Discoverer

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Deletes the Stlk and p120ctn sequences.

(Myster and Peifer, 2003.9.11)

Synonyms and Secondary IDs (4)

Reported As

Symbol Synonym

247

(Coulthard et al., 2010)

Df(2R) 247

(Coulthard et al., 2010)

Df(2R)247

(Gonçalves et al., 2018, Coulthard and Alm, 2010.7.21, Coulthard et al., 2010)

Df(haspin)

(Xie et al., 2015)

Name Synonyms

Secondary FlyBase IDs

References (9)

Report Sections