FB2024_03 , released June 25, 2024
Aberration: Dmel\In(3LR)P88
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General Information
Symbol
In(3LR)P88
Species
D. melanogaster
Name
Inversion (3LR) Pasadena
FlyBase ID
FBab0005448
Feature type
chromosomal_inversion
Computed Breakpoints include

61A1-61A2;89C2

Sequence coordinates
3L:97,494..97,494 (In(3LR)P88:bk1)
(Miller et al., 2016)
3L:263,127..263,127 (In(3LR)P88:bk2)
(Miller et al., 2016)
3R:16,382,132..16,384,934 [-] (In(3LR)P88:bk2)
(Duncan et al., 1998)
3R:16,383,781..16,383,781 (In(3LR)P88:bk3)
(Miller et al., 2016)
Member of large scale dataset(s)
Nature of Aberration
Cytological Order
Progenitor
Mutagen
X ray
Class of aberration (relative to wild type)
chromosomal_inversion
(FlyBase, 2007)
bipartite_inversion
(Miller et al., 2016, FlyBase, 2007)
Class of aberration (relative to progenitor)
chromosomal_inversion
bipartite_inversion
(Miller et al., 2016)
Breakpoints

61A;89C

(Micol et al., 1990)

61A1-61A2;61A1-61A2;89C2-89C4;[61A1-61A2];[61A1-61A2];[89C2-89C4];

(Miller et al., 2016)
Causes alleles
ssaP88
(Miller et al., 2020, Miller et al., 2016, Duncan et al., 1998, Kirpichnikova, 1992, Struhl, 1982)
Tudor-SNP88
(Miller et al., 2020, Miller et al., 2016)
Carries alleles
Transposon Insertions
Formalized genetic data

bk2 hits ss

Genetic mapping information
Comments

The 5' end of this breakpoint corresponds to 3L:263127 and the 3' end corresponds to 3L:263132 (release 6 coordinates), meaning that 4bp of genomic sequence is deleted at this breakpoint.

(Miller et al., 2016)

The 5' end of this breakpoint corresponds to 3R:16383781 and the 3' end corresponds to 3R:16383775 (release 6 coordinates), meaning that 7bp of genomic sequence is duplicated at this breakpoint.

(Miller et al., 2016)
Comments on Cytology

Limits of break 1 from polytene analysis (citation unavailable) Left limit of break 2 from polytene analysis (citation unavailable) Right limit of break 2 from complementation mapping against ss (FBrf0038072)

Sequence Crossreferences
DDBJ / EMBL / GenBank
DNA sequence
Protein sequence
Gene Deletion and Duplication Data
Genes Deleted / Disrupted
Complementation Data
Completely deleted / disrupted
ss
(Duncan et al., 1998)
Partially deleted / disrupted
Molecular Data
Completely deleted
Partially deleted
Genes NOT Deleted / Disrupted
Complementation Data
 
Molecular Data
 
Genes Duplicated
Complementation Data
Completely duplicated
Partially duplicated
Molecular Data
Completely duplicated
Partially duplicated
Genes NOT Duplicated
Complementation Data
 
Molecular Data
 
Affected Genes Inferred by Location
    Phenotypic Data
    In combination with other aberrations

    Viable in heterozygous combination with Tp(3;3)sbd104. Viable in heterozygous combination with Tp(3;3)bxd100. Viable in heterozygous combination with Tp(3;1)P115. Viable in heterozygous combination with Tp(3;2)iab2P10. Viable in heterozygous combination with Df(3R)P10 Dp(3;3)sbd104. Viable in heterozygous combination with Df(3R)Ubx109.

    (Struhl, 1982)
    NOT in combination with other aberrations

    Homozygous lethal.

    (Struhl, 1982)
    Stocks (0)
    Notes on Origin
    Discoverer

    E.B. Lewis.

     
    Balancer / Genotype Variants of the Aberration
     
    Separable Components
    Other Comments
     

    Originally described as deficient for ss; however Struhl (1982) contends that it carries an extreme ssa allele ssa bx+

    Synonyms and Secondary IDs (2)
    Reported As
    Symbol Synonym
    In(3LR)P88
    (Miller et al., 2020, Miller et al., 2019, Miller et al., 2016)
    Name Synonyms
    Inversion (3LR) Pasadena
    Secondary FlyBase IDs
      References (11)