FB2024_02 , released April 23, 2024
Transcript: Dmel\uex-RF
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General Information
Symbol
Dmel\uex-RF
Species
D. melanogaster
Annotation Symbol
CG42595-RF
FlyBase ID
FBtr0302227
Feature type
Associated gene
Evidence Rank
Length (nt)
3417
Evidence Score
Genomic Location
Genomic Maps
cDNA Clones Consistent with the Transcript ( 32 )
cDNA Clones, Fully Sequenced
Exact Match
    Contained within the annotated transcript, internally consistent
      End(s) extend beyond the annotated transcript, internally consistent
        cDNA Clones, End Sequence Only (ESTs)
        End(s) extend beyond the annotated transcript, internally consistent
          Sequence
          GTCCGCCGTGTGTCTCCTCCAAGTTGTCCTTCTTTCGTTTCTCCTGGTCTCGGCCGGTCTGGATAAGGCGTCACACGATG
          AGTTTATTGTCATGAATTTAAGTATGCAGTCCCGTGTGCTGTTGTTGTGCTAACGTATTAAAAATGTATTTTTTTGTAGA
          AGTGGTATTCAGAGTCAGAAAATTTATTGTGCTAATTGGGGTAAGTTACCTATTTAACAAATCATTGTAATTCGTTTTAC
          CATAAGAAAATTTTGCCATTTAAGCCAAATGCGATTCATTTCAGTATTCAATTATTTTTTAATTATTTTAAATAAAACTC
          AAAGTAATGATTTACAGTTTTTTCCACAGTTGTTCTTTGTATATAACCAAACTTCAATTAGAGAGAAGAATCCCGTGGGA
          ATCATTCGAAAGTGATTTCTGGAACAGGGCCGATAACTAAATATCTTAAGAGTTCTATATTCGTCGGTAGTTGACTAATA
          CCTTAAATTCAGGCTTTCCCTGCATGTTAGCTCTTTATTACAATCGATAGTAATAAGTACAATCGATAGTAGAGTCGATG
          AATATGCGGATCGAGGAAAGGCAGAACATTTAACGTACTAGTAAATAGTACATTTAAGAGAAAAGGAAAAGGTTGCACAG
          TATAATTTGAGAGTGGAAAAAAGACAGTTTTTCCAGTAAATATAAAAGTGGTAGTGACAGATGCCAATAAAATACTCCCA
          GGAGAGAAGTATGAAAAATCGTAATCAGTGCATACACATGTGTGAAATACACACTAAATGGGCTGAACTCCTAAAATACA
          CCGAAGATTACAGCCCAACACGGTTGAATATTATAAACTTAATAGACAGAGTATATATATTGCTCTGTTCGATTAAAATG
          AACACATATTTCATATCATTTATTACAATAATTATTTTCGCCAACGGTATAAATGGAACTTCTGTGGATACAAGTAATAA
          ATTATTGCTGCAGAAAGCGAATGACTTCAACTTATCACAAAACTTATCAAGTTCACGGACACGGCGAACCATTGCGAATT
          CTTTTCGTATAGTTGGAATTCGTTTGGAGGACGAAACAGTAGAAACTAAAAACGGAATACCAACTGTGTTAGTAGACAAG
          GAACAACAATTTCGAGTGTTTGGTAGCGGATTAGAAGAAAATACAGCTATTACGTTTACAAATGAAAAAAACGATTATGG
          CGGTCCATGTCTAAAGCCAGCTACTGATCTGTTTACACCGATAGAAGTATCAAGCAACGGATTTTCAGCACTTTACTCAG
          TAAAGTTTCCATCATTTATAAATGAATTTTTTATTTGTGCCAAAACAGCTGAGAAAACGACAAATCACAGCAAAGCTGCA
          ACGACGACGCCTCTGGAACATCAAGGAAACTCAGATTTTTTAAAAATAAAAACATTCGAACCGTTAATACCTGTATGGCT
          GGCCATAATCATCATCGTAACATGTTTGGGCTTTTCGGCTTTGTTTTCAGGCCTTAACTTGGGTTTAATGTCAATGGACC
          GCACAGAATTAAAGATCTTGCGGAACACTGGTACGGAAAAAGAAAAAAAATATGCGTCAAAGATTGCACCTGTCCGTGAT
          CAAGGTAATTATCTTTTGTGCAGTATCCTCTTGGGTAATGTGTTGGTAAACTCAACTTTTACCATTCTGCTGGATGGTTT
          AACTTCTGGACTCTTTGCTGTTATATTTTCCACATTGGCCATCGTACTTTTCGGTGAAATAACTCCACAGGCAGTGTGTT
          CAAGACATGGATTGGCGATTGGAGCCAAAACCATTTTAGTAACAAAAACAGTAATGGCTATAACAGCACCATTATCTTAT
          CCAGTTTCGCGTATTCTTGATAAATTGTTAGGCGAAGAAATTGGTAATGTTTACAATCGAGAACGTTTAAAAGAACTTGT
          TCGTGTTACAAACGATGTAAATGATCTTGATAAAAATGAAGTAAACATAATATCCGGAGCTCTAGAATTGCGTAAGAAAA
          CTGTTGCGGACGTCATGACGCACATAAATGATGCCTTTATGCTTTCATTGGATGCCCTACTTGATTTTGAAACTGTGTCG
          GAAATTATGAATTCTGGTTATTCTCGTATTCCAGTGTACGATGGTGATAGAAAGAATATTGTGACTTTACTTTATATTAA
          AGATTTGGCATTTGTTGATACTGATGATAACACGCCTTTAAAAACGCTTTGCGAATTTTACCAAAATCCTGTTCATTTCG
          TATTTGAAGATTATACCTTGGATATTATGTTTAATCAATTTAAAGAAGGAACAATTGGTCACATTGCTTTTGTGCACCGC
          GTGAATAATGAAGGAGATGGTGATCCTTTTTATGAAACGGTCGGGTTAGTTACTCTGGAAGATGTAATTGAAGAACTAAT
          TCAAGCTGAAATTGTTGATGAAACCGATGTTTTTGTTGACAACCGCACAAAAACGAGAAGAAACAGATACAAAAAAGCTG
          ATTTTTCAGCATTTGCTGAACGTCGTGAAGTGCAAACTGTTCGGATATCCCCTCAATTAACACTGGCTACTTTCCAGTAC
          CTTAGCACTGCTGTCGATGCATTTAAAAAAGATGTTATTTCTGAACTCATTTTACGGAGGTTACTCAATCAAGACGTGTT
          TCACAACATAAAAACAAAAGGAAAGAGTAAAGATGATCCAAGTCTTTATATTTTCACTCAAGGAAAAGCTGTCGACTTTT
          TTGTACTTATTTTGGAGGGTCGTGTAGAAGTCACAATTGGCAAGGAAGCGCTTATGTTTGAAAGCGGGCCCTTTACTTAT
          TTTGGAACCCAGGCGCTGGTCCCCAATGTAGTTATCGACTCTCCCACACAAATGGGTTCTTTGCAGTCCCTAAATATGGA
          CTCAAAAATACGACAATCCTTTGTACCTGATTACTCAGTTCGTGCTATATCGGATGTGATTTATATTACAATTAAAAGGG
          TCCTGTACCTTACTGCAAAAAAAGCTACATTGTTGGAAAAAAGTCGAAAATCTGGAACATTTTCCAGTGAAACATTTGAT
          GACGAAGTGGAACGTTTATTACACTCTATAACAGAAAACGAAAAACCTTCTTGCTTTGCACAAAATCAAAGTACTAGACG
          TCTATCTAACCGAAGTATAAATTCTTCCCCAACAAATATGAATAGGTCTCCCGATTTTGTGTATAACAGTGTCGACGAAG
          CCATCCAAGACGACACAAAATTAAAAAACATAAAACATGCGGACAATGTCACAACAAGTATAAGTTTAGTTGCTGCTGAG
          TTGGAGGACCTTCACAGTGGAGAACAAGATACGACAGCTGCTTCCATGCCCCTTTTGCCAAAGCTAGATGACAAATTCGA
          GAGCAAGCAAAGTAAGCCCTAAACACAAAATGCAGGCCACATTTATATATATGCAGT
          
          Other Products of this Gene
          Other Transcripts
          Name
          FlyBase ID
          Length (nt)
          FBtr0302226
          3937
          FBtr0334938
          2867
          FBtr0346683
          2867
          Polypeptides
          Derived from THIS transcript
          Name
          FlyBase ID
          Length (aa)
          FBpp0291437
          834
          Derived from OTHER transcripts
          Name
          FlyBase ID
          Length (aa)
          FBpp0291436
          834
          FBpp0306957
          834
          FBpp0312292
          834
          Comments

          GC splice donor site postulated.

          Downstream translation start supported by conservation across Drosophila species.

          3' UTR based on RNA-Seq data.

          External Crossreferences and Linkouts ( 1 )
          Crossreferences
          RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
          Synonyms and Secondary IDs (2)
          Reported As
          Symbol Synonym
          CG42595-RF
          uex-RF
          Secondary FlyBase IDs
            References (0)