FB2024_04 , released June 25, 2024
Recombinant Construct: P{UAS-LT3-Dam-Polr2A}
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General Information
Symbol
P{UAS-LT3-Dam-Polr2A}
FlyBase ID
FBtp0095495
Feature type
transgenic_transposable_element
Component Allele(s)
Also Known As
UAS-LT3-Dam-Pol II
Size
Expression Data
Associated insertion(s)
Molecular map
Description and Uses
Construct components
Component allele Disc\RFPmCherry.UAS.cSa
Transgenic product class
Component
Use(s)
Encoded product / tool
Description

UAS regulatory sequences are fused upstream of mCherry.

Transgenic product class
Component
Use(s)
Encoded product / tool
Description

The P{UAS-LT3-Dam-RpII215} construct is used in the "Targeted DamID" ("TaDa") technique, in which translation of the Ecol\dam protein at very low levels in a cell- or tissue-specific fashion enables genome-wide profiling of DNA- or chromatin-binding proteins without requiring cell sorting, fixation or affinity purification and avoiding the toxicity associated with higher levels of Ecol\dam expression. In the TaDa system, a primary open reading frame (ORF1) is followed by two stop codons and a secondary ORF (ORF2) which includes Ecol\dam fused to a DNA- or chromatin-binding protein of interest. The presence of ORF1 greatly reduces the translation of the Ecol\dam-containing ORF2. In the P{UAS-LT3-Dam-RpII215} construct, the first ORF encodes full-length mCherry, the second ORF is a fusion protein consisting of the RpII215 gene fused to the Ecol\dam ORF and tagged with Tag:MYC, and the regulatory sequences that drive expression are UAS sequences.

Sequence Data
Sequence (FB)
Associated Sequence Data
DNA Sequence
Extent
Segments and Size
Total Size
Left end
Right end
 
Segments
Num
Orientation
Symbol
Reference
Phenotypic Data
Expression Data
Reporter Expression
Additional Information
Statement
Reference
 
Marker for
Reflects expression of
Reporter construct used in assay
Progenitors and Descendants
progenitor(s)
descendant(s)
Comments

The P{UAS-LT3-Dam-RpII215} construct is used in the "Targeted DamID" ("TaDa") technique, in which translation of the Ecol\dam protein at very low levels in a cell- or tissue-specific fashion enables genome-wide profiling of DNA- or chromatin-binding proteins without requiring cell sorting, fixation or affinity purification and avoiding the toxicity associated with higher levels of Ecol\dam expression. In the TaDa system, a primary open reading frame (ORF1) is followed by two stop codons and a secondary ORF (ORF2) which includes Ecol\dam fused to a DNA- or chromatin-binding protein of interest. The presence of ORF1 greatly reduces the translation of the Ecol\dam-containing ORF2. In the P{UAS-LT3-Dam-RpII215} construct, the first ORF encodes the full-length mCherry form of Disc\RFP, the second ORF is a fusion protein consisting of the RpII215 gene fused to the Ecol\dam ORF and tagged with T:Hsap\MYC, and the regulatory sequences that drive expression are Scer\UAS sequences.

Stocks (0)
Stocks containing insertion(s) of this recombinant construct
External Crossreferences and Linkouts ( 0 )
Synonyms and Secondary IDs (10)
Reported As
Symbol Synonym
P{UAS-LT3-Dam-Polr2A}
P{UAS-LT3-Dam-RpII215}
UAS-LT3-Dam-PolII
UAS-LT3-NDam-Pol II
UAS-LT3-NDam-RNA Pol II
UAS-LT3-NDam-RNAPol II
UAS-LT3-NDam-RpII215
pUAST-LT3-NDam-Pol II
Secondary FlyBase IDs
    References (9)