FlyBase Natural Transposon Report: Dmel\baggins

General Information

Symbol

baggins

Species

D. melanogaster

Feature type

natural_transposable_element

FlyBase ID

FBte0000906

Sequences and Components

Complete element (bp)

5453

(Kaminker et al., 2002)

Terminal repeat (bp)

Reference sequence

transposon_sequence_set.embl.txt.gz

Component genes

Sequence Accessions

Sequence Ontology (SO)

Transposon type

non_LTR_retrotransposon

(Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

transposable_element

(Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

Insertions and Copy Number

Copy number and comments

14 in euchromatin of Release 3 genome annotation, of which zero are full length.

(Kaminker et al., 2002)

Search for

Target Site Duplication

Size (bp)

Orthologs

Curated drosophilid orthologs

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

BAGGINS

(Rigal et al., 2022, Luo et al., 2020, Saint-Leandre et al., 2020)

BAGGINS1

(Satyaki et al., 2014, Gunawardane et al., 2007, Kapitonov and Jurka, 2003)

Baggins

(Ruminski et al., 2011, Hamilton et al., 2009)

Baggins1

(Kapitonov and Jurka, 2003)

CG3392

CG8672

(Mount, 2001.8.14)

baggins

(Wierzbicki et al., 2023, Huang et al., 2021, Villanueva-Cañas et al., 2019, Kofler et al., 2015, Senti et al., 2015, Huang et al., 2014, Kofler et al., 2012, Pane et al., 2011, Petrov et al., 2011, Deloger et al., 2009, Li et al., 2009, Kawamura et al., 2008, Bergman and Bensasson, 2007, Brennecke et al., 2007, Nishida et al., 2007, Smith et al., 2007, Bergman et al., 2006, FlyBase, 1992-)

baggins1

(Ohtani et al., 2013, Malone et al., 2009, Brennecke et al., 2008, Kapitonov and Jurka, 1997-)

Secondary FlyBase IDs

FBgn0033014
FBgn0032939
FBgn0063440
FBtp0017054

References (39)

Report Sections

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