FB2024_04 , released June 25, 2024
Natural Transposon: Dmel\BS-element
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General Information
Symbol
BS-element
Species
D. melanogaster
Feature type
FlyBase ID
FBte0000780
Sequences and Components
Complete element (bp)
Terminal repeat (bp)
Component genes
Sequence Accessions
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Sequence Ontology (SO)
Insertions and Copy Number
Copy number and comments

15

29 in euchromatin of Release 3 genome annotation, of which 6 are full length.

Target Site Duplication
Size (bp)

8

Orthologs
Curated drosophilid orthologs
Comments

The BS element is a LINE-like transposable element. It has no terminal repeats, an A-rich sequence at the 3' end of the coding strand and two long open reading frames. The first open reading frame contains motifs characteristic of the gag gene of retroviruses and the second contains motifs characteristic of reverse transcriptase.

First described as a sequence inserted within the gypsy element associated with the acHw-1 mutation. It was reported to have inverted terminal repeats of 2.5 kb, but according to the annotation of EMBL AC X77571 this is not so. The sequence of the internal domain is well conserved in the genome (Livingstone and Finnegan). Restriction map in Lindsley, Zimm (1992) p. 1098.

Other Information
Etymology
External Crossreferences and Linkouts ( 16 )
Crossreferences
GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
Synonyms and Secondary IDs (6)
References (61)