FlyBase Natural Transposon Report: Dmel\gypsy5

General Information

Symbol

gypsy5

Species

D. melanogaster

Feature type

natural_transposable_element

FlyBase ID

FBte0000308

Sequences and Components

Complete element (bp)

7369

(Kaminker et al., 2002)

Terminal repeat (bp)

Reference sequence

transposon_sequence_set.embl.txt.gz

Component genes

Sequence Accessions

Sequence Ontology (SO)

Transposon type

LTR_retrotransposon

(Mugnier et al., 2008, Kaminker et al., 2002, Kapitonov and Jurka, 1997-)

transposable_element

(Mugnier et al., 2008, Kaminker et al., 2002, Bowen and McDonald, 2001, Kapitonov and Jurka, 1997-)

Insertions and Copy Number

Copy number and comments

2 in euchromatin of Release 3 genome annotation, of which 1 is full length.

(Kaminker et al., 2002)

Search for

Target Site Duplication

Size (bp)

(Linheiro and Bergman, 2012)

Orthologs

Curated drosophilid orthologs

Comments

Other Information

Etymology

External Crossreferences and Linkouts ( 0 )

Synonyms and Secondary IDs (6)

Reported As

Symbol Synonym

CG2485

GYPSY5

(Rigal et al., 2022, Satyaki et al., 2014, Vujatovic et al., 2012, Brower-Toland et al., 2009)

Gypsy

(Rozhkov et al., 2010)

gypsy 5

(Klattenhoff et al., 2009)

nik

(Bowen and McDonald, 2001)

Secondary FlyBase IDs

FBgn0030279
FBgn0063432
FBtp0017062

References (42)

Report Sections

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