FB2024_04 , released June 25, 2024
Physical Interaction report
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General Information
Interaction Type
physical association
Interacting Genes
SmB, snRNA:U1:95Ca
FlyBase ID
FBig0000103148
Interaction Network
Interactions Browser links
SmB network
snRNA:U1:95Ca network
esyN Network Diagram
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Protein
RNA
Selected Interactor(s)
Common Interactor(s)
Reported Interactions
FBrf0194681-11.coIP.NB
Reference
Rajendra et al., 2007
Description
physical association
Assay
Collection
Source/Stage
Cell line used
S2-DGRC
Participants
Corresponds to
Reported as
Role
Note
SmB 

SmB

bait

GFP tag

snRNA:U1:95Ca 

U1 snRNA

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was cell extract of S2 cell line; bait produced from transfected construct; prey produced from endogenous gene.

(Rajendra et al., 2007)
FBrf0194681-6.coIP.A
Reference
Rajendra et al., 2007
Description
physical association
Assay
Collection
Source/Stage
Cell line used
S2-DGRC
Participants
Corresponds to
Reported as
Role
Note
SmB 

SmB

bait
snRNA:U1:95Ca 

U1 snRNA

prey

[32]P UTP label

Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Interaction in vitro; bait derived from S2 cell extract; prey produced and labeled by in vitro transcription.

(Rajendra et al., 2007)
FBrf0211144-6.coIP.PCR
Reference
Gonsalvez et al., 2010
Description
physical association
Assay
Collection
Source/Stage
ovary / femaleadult stage
Cell line used
Participants
Corresponds to
Reported as
Role
Note
SmB 

SmB

bait
snRNA:U1:95Ca 

U1snRNA

prey
Experimental entities
Corresponds to
Identifier
Reported
Role
Note
Subregions with role in interaction
Corresponds to
Description
Role
Coordinates
Note
Isoform-specific participants
Corresponds to
Description
Role
Note
Comments concerning this interaction

Source was ovaries of wild-type fly line; bait produced from endogenous gene; prey produced from endogenous gene.

(Gonsalvez et al., 2010)
External Crossreferences and Linkouts ( 0 )
References (2)