FB2024_03 , released June 25, 2024
Clone: Dmel\GM13388
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General Information
Symbol
Dmel\GM13388
Species
D. melanogaster
Name
GM13388
FlyBase ID
FBcl0148358
Feature type
cDNA_clone
Computed gene(s)
Dmel\spict
 
Collection Status
DGC gold BDGP
Known Problems
none
FlyBase assessment
    Library
    GM_pOT2_cDNA
    • GM cDNA library of D. melanogaster, Oregon-R strain, adult female, ovary, pOT2 vector.
    Strain
      Vector
      Tissue Source
      Stage
      Tissue/Position (including subcellular localization)
      Reference
      oogenesis stage S1 -- S6 & adult stage | female
      ovary
      (Rubin et al., 2000)
      Sequence Data of the Insert
      Full Length Sequence
      Total bases
      1,461
      NCBI
      AY089521
      Full Length sequence dataSequence Downloader
      GACTTTCTGGTGCGAAAAGCAGGAGCGGATCACACAGCGGATTAGCGATGAACAGCGACGGCGAAGCCTCATCACTGCAG
ATGCCCCAGGTGACGGTGGGTGGCATGCTGCCGGTAGAAGCCAACCAATCGCCTGAAACCGCTCCGCTTTCGATGGCGGA
GACGGTGTCCAACACGGACTTCTACATCGGCGTTGGCCTGGCTATCTCCTCCTGCTTCTTCATCGGTTCCAGCTTCATCA
TCAAAAAGAAGGCACTCATTCGGCTGAGCAGGTACGGCGAGGTGCGGGCGTCAGCTGGAGGATTTGGATATCTGAGGGAG
TGGATCTGGTGGGCGGGCCTTCTGACAATGGGTGTGGGAGAAGCGGCCAACTTTGCGGCCTACGCCTTTGCCCCCGCTTC
ATTGGTCACTCCGTTAGGCGCGCTGAGTGTTATCATCTCAGCCGTGATGGCCTCCAGATTCCTCAACGAGAAGCTAAACT
TGCTGGGGAAGATCGGCTGCTTTCTGTGCATACTGGGATCCACCATCATTGTGATTCACTCGCCCAAAGAGAAGGAGATC
GAGGATTTGCAGCTGCTATTCGATATGCTTTTGGATCCGGTTTTCATTCTATACGTGATCTGCATCGTCGGTTCCACGGT
GTTTGTGGCCTGCTTCATTGCACCACGGCATGGGCACACCAATGTGGTAGTTTATATCTTCTTGTGCTCCGGCATCGGAT
CTCTGACTGTGATGTCCTGCAAGGCATTGGGCCTAGCCATACGGCAGACGCTGAATAACGGAGGCAACGTCTTCCTCACA
TGGATGCCATGGTTCCTGATCCTGGTCACCGTCACTTTCATAGCCATCCAGATGAACTATCTGAACAAGGCGCTGGATAT
ATTCAATACTAGTATAGTTACTCCAGTGTACTATGTAATGTTCACCACCCTGGTGATAGCTGCGTCTGCCATCCTCTTCA
AGGAGTTCACCCACATGCGGTTCGATGATATTCTCGGCGATGTGTGCGGCTTCCTGATCGTTATCACAGCTGTGTTCCTG
CTCAACGCGTTCAGAGATATTGATATATCGCTGAACGATGTACGTGGACTGATGCGACCGAAAATGCAGCGGGTGTCGCA
GTTCGACGAGGAGGTGCTGGTCACCAGCAATACCAAGGAACGTCGCCTGTCCTACGGATCCAGCGACATCTTCCGGAAGG
CCTGACACAAGCAGCGCTACCAGGTCTAGTTACATCCCTTGCAGCGGCTGACCTGAAGACAAGGTTGCTTTACTCCGTAA
ACGAGGCATTGGTCCAAATATCTGTGCATATCACCTGCAATCACTTTCATCTCATCATTTCCATTTATTGTTCCTTCACT
CTTGTTATTCATACATTCGCTAGCATAAGCACATAGGTTTAGGTTACACTTACATATATTAAACACGACTTAATGAAAAC
GAAAAAAAAAAAAAAAAAAAA
      Library Information (1)
      Library: GM_pOT2_cDNA
      Description

      Cloned cDNAs prepared from polyadenylated RNA isolated from stage S1-S6 ovaries.

      (Rubin et al., 2000)
      Sample preparation

      Ovaries at stage 1-6 of oogenesis were collected from a non-isogenic Oregon R strain P2 population cage.

      Protocol

      RNA from ovaries was poly(A)+ selected once (provided by A. Spradling). cDNA made using Stratagene ZAP-cDNA synthesis kit; oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. For clones GM12101 and higher, cDNA directionally cloned into EcoRI/XhoI-digested pOT2 plasmid.

      (Rubin et al., 2000)
      Comment
      Reported As
      Symbol Synonyms
      GM
      (Rubin et al., 2000)
      GM_pOT2
      (Rubin et al., 2000)
      GM_pOT2_cDNA
      References (1)
      Review (1)
      Rubin et al., 2000, Science 287(5461): 2222--2224
      A Drosophila complementary DNA resource. [FBrf0127297]
      External Crossreferences and Linkouts ( 2 )
      Linkouts
      DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
      Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
      Synonyms and Secondary IDs (0)
      Reported As
      Symbol Synonym
      Secondary FlyBase IDs
        References (0)