FB2024_03 , released June 25, 2024
Clone: Dmel\GH12609
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General Information
Symbol
Dmel\GH12609
Species
D. melanogaster
Name
GH12609
FlyBase ID
FBcl0109729
Feature type
Computed gene(s)
 
Collection Status
BDGP
Known Problems
none
FlyBase assessment
  • reverse transcriptase error
  • Caution: This cDNA clone replaced by FI03674
Library
GH_cDNA
  • GH cDNA library of D. melanogaster, iso-1 strain, adult head.
Strain
    Vector
    Tissue Source
    Stage
    Tissue/Position (including subcellular localization)
    Reference
    Sequence Data of the Insert
    Full Length Sequence
    Total bases
    5,314
    NCBI
    Full Length sequence dataSequence Downloader
    CGGCATGCCGGTTCATCAACGAACGCCACATCAGTTCTAAATCAAATTAAGAAAAACTGGGCTAAAACCAGCCGAAAACT
    GGTGAAAAGTAAAATATTTGGAGAAGGAAAGCCTTAAGTTCCTCTCTACGCTTAGTATACGTAATGTGCGTGGTTTAATC
    TACGTTAAAACAAGTGGAAACCATGTTACGTGCCGTGGCTTTGTGTGTGTCTGTGGTGCTCATAGCACTATATACGCCAA
    CTTCTGGGGAATCCAGTCAGAGCTATCCCATCACCACGCTAATCAACGCGAAATGGACGCAGACGCCCCTATATCTGGAA
    ATCGCCGAGTATCTGGCCGATGAGCAGGCGGGCCTCTTCTGGGATTACGTTTCGGGGGTGACCAAGTTGGACACGGTTCT
    CAACGAATATGATACCGAGTCGCAACAGTACAATGCCGCCTTGGAGCTGGTCAAGAGCCATGTGAGTTCTCCCCAATTGC
    CCCTGCTTAGGCTGGTGGTATCCATGCATAGCTTGACGCCCCGGATCCAGACCCACTTCCAGTTGGCCGAGGAACTGAGG
    AGCAGTGGCTCTTGTCAGAGCTTTACTTTTGCCCAGGTGGGTTCCGAACTGGCCTGCAGCTTTAACGAGCTGCAGAAGAA
    GCTGGAAGTGCCGCTCGCCAAGGATAGCTTGGATGCTTCTGTTGTCACCTACAGCTTTGATCACATTTTCCCTGGCAGTG
    AGAACAATACCCGCACTGTGGTACTATACGGCGATTTGGGAAGCTCTCAATTCCGCACCTATCACAAACTATTGGAAAAG
    GAAGCCAATGCTGGCCGGATTCGTTACATCTTGCGTCATCAATTGGCCAAGAAGGACAAGCGACCGGTACGACTTTCGGG
    CTATGGAGTGGAACTCCATCTGAAGTCAACGGAATACAAGAGTCAGGATGATGCTCCAAAGCCCGAAGCTGGTTCCACTT
    CTGATGAGGATTTGGCTAATGAATCGGACGTCCAGGGCTTTGATTTCAAGGTGCTGAAGCAGAAGCATCCTACACTTAAG
    AGAGCGCTGGATCAACTGCGTCAGAGGCTTCTTCAGGGAAACGATGAGATCGCCCAATTGAAAGCATGGGAGTTCCAGGA
    TTTGGGTCTCCAGGCGGCCGCTGCTATTGCAGAAATACAGGGTGATGAAACCCTACAAATTCTTCAATATACTGCCCATA
    ATTTCCCCATGTTGGCCAGAACCCTGCTGGCCCACAAGGTTACGGATGGCTTAAGGGCGGAGGTAAAGCATAATACGGAA
    GCATTTGGAAGAAGCTTGAATGTAGCGCCTCCAGATGGTGCCCTTTTCATCAATGGACTCTTCTTCGATGCTGACACAAT
    GGATCTGTATTCCCTGATTGAGACGCTGCGCTCGGAGATGCGTGTTCTCGAGAGTCTGCACAGTAATAATGTGAGGGGAA
    GCCTTGCCAGCTCCTTGCTCGCCTTGGATCTGACGGCCTCCAGCAAAAAAGAATTCGCCATCGACATCCGTGACACTGCA
    GTACAGTGGGTCAACGATATTGAAAACGATGTGCAGTACCGCAGGTGGCCCTCATCGGTGATGGATCTTTTGCGTCCAAC
    CTTTCCTGGCATGTTAAGGAATATCCGAAAGAATGTGTTCAATTTGGTCCTAGTGGTAGACGCGCTGCAGCCCACAGCTA
    GAAGTGTTATTAAACTGTCAGAGTCGTTTGTCATCCATCAAGCTCCCATTCGCTTGGGTTTGGTTTTCGATGCGAGGGAC
    GCCAACGAGGATAATCTTGCAGATTACGTAGCCATCACGTGCGCCTATAACTATGTGAGTCAGAAAAAGGATGCCCGAGC
    TGCTTTAAGTTTCCTCACCGACATCTACGCAGCAGTTGGTGAGACCAAAGTGGTCACGAAAAAAGACATAGTCAAGCAAC
    TAACGAAGGAATTTACATCATTAAGCTTTGCCAAAGCGGAGGAGTTCCTGGAGGAAGATTCCACGTACGACTATGGCAGG
    GAGCTCGCAGCAGAGTTCATTCAGCGGCTGGGATTCGGAGACAAGGGACAACCTCAGGCCTTGTTGAATGGTGTTCCAAT
    GCCCAGCAACGTTGTGACCGCCGATAGCGACTTCGAGGAGGCTATTTTCACCGAGATTATGACCCACACCAGCAATCTCC
    AAAAGGCTGTGTACAAAGGTGAACTGACAGACAACGATGTAGCCATTGATTATCTGATGAATCAACCTCACGTGATGCCC
    AGATTGAATCAGCGAATCCTAAGCCAGGAGGATGTGAAATATCTTGATATTAACGGCGTGGCCTACAAAAATCTTGGCAA
    TGTTGGAGTTTTAAATCGTCTGTCTAACCGGGATATGACCGCTACGCTAATGGATAATCTTAAATACTTTGGTGGCAAGA
    AGTCTACGGAGCTTATTGGCCGAGCATCCCTACAGTTCCTAACGATTTGGGTGTTTGCTGATTTGGAAACTGACCAGGGT
    CGAGATCTGCTCACCCATGCCCTGGACTATGTCCAAAGTGGAGAGAGTGTGCGAGTCGCATTCATTCCAAACACTGAAAG
    CTCTTCCGCCTCAAGCCGGAGGAATCTTAATCGATTGGTTTGGGCTGCCATGCAGAGTCTTCCACCAACTCAAGCCACGG
    AGCAGGTTCTCAAGTGGCTAAAGAAACCAAAGGAGAAAATTGAGATACCCACTCAGCTCGAGGATATCCTGGGATCTACA
    GAGCTGCACCTGAAGATGTTGAGAGTTTATTCCCAGCGAGTGTTGGGTCTAAATAAATCCCAGCGTTTGGTCATCGGTAA
    TGGGCGGCTTTATGGGCCCCTTTCGTCGGATGAAAGCTTTGATAGCGCCGATTTCGCTTTGCTAGCCAGGTTCAGTTCTC
    TACAGTATAGCGATAAGGTGCGTCAGGTCCTGAAGGAATCTGCTCAAGATGTCAATGAGGAATTCAACAGCGATACATTG
    CTTAAGTTGTATGCCAGCCTGCTTCCCAGGCAAACCAAAACTCGCTTTAAGCTACCAACGGACTTAAAAACCGATCACTC
    GGTTGTAAAACTACCGCCCAAACAGGAGAATCTTCCCCATTTTGATGTTGCCGCCGTTTTGGATCCCGCCTCCCGAGCAG
    CTCAAAAACTAACGCCAATACTTATTTTGCTTCGTCAAGTGCTGAACTGCCAATTGAACTTATACCTGATTCCCGTCCCC
    CAGCACAGCGATATGCCCGTGAAGAACTTCTACAGATACGTTGTGGAACCGGAGGTCCAATTCGAGGCGAATGGAGGCCG
    ATCTGATGGTCCTTTGGCCAAATTCAGTGGATTGCCAGCCAATCCTCTGCTGACCCAGCAGCTGCAGGTTCCCGAGAACT
    GTTGGTCGAAGCTGTGAGAGCAGTTTACGATCTGGACAACATTAAGTTGACCGATATTGGTGGACCTGTGCACAGCGAAT
    TCGATCTGGAGTATCTGCTGTTGGAGGGTCACTGCTTTGATGCTGCTAGCGGCGCTCCGCCCAGAGGACTTCAGTTGGTG
    TTGGGTACCCAGAGTCAACCTACCTTGGTAGATACTATTGTGATGGCGAATTTGGGTTATTTCCAACTTAAAGCCAATCC
    AGGAGCTTGGTCCCTACGCTTGCGTGAAGGCAAATCGGCGGATATTTATGCAATCAGCCACATTGAAGGAACAAATACCC
    ATCATTCGGCTGGCTCTTCTGAAGTTCAGGTTCTTATAACCTCCTTGCGATCCCATGTTGTCAAATTAAGGGTGTCTAAG
    AAGCCAGGCATGCAGCAGGCGGAACTCCTGTCAGATGACAACGAACAGGCAGCGCAATCAGGCATGTGGAACAGCATCGC
    CAGCAGTTTTGGCGGCGGCAGTGCCAACCAAGCAGCCACTGATGAGGATACGGAAACCATCAACATTTTCTCTGTGGCAT
    CGGGACACTTGTACGAACGTCTTCTAAGGATCATGATGGTTTCGCTGCTAAAGCACACAAAATCACCTGTGAAGTTCTGG
    TTCTTGAAGAACTATCTTTCGCCGCAATTTACGGATTTCCTTCCTCACATGGCCAGTGAGTACAACTTCCAGTACGAATT
    GGTCCAGTACAAATGGCCCCGCTGGCTGCATCAGCAAACGGAAAAACAGAGGACCATTTGGGGCTACAAGATCCTTTTCC
    TGGACGTGCTCTTCCCGCTGAATGTGAGGAAAATCATTTTCGTGGATGCCGATGCCATCGTAAGAACGGATATAAAGGAG
    TTGTATGACATGGACCTCGGAGGAGCACCCTATGCCTACACGCCATTCTGCGATTCCCGCAAAGAGATGGAGGGCTTCCG
    ATTCTGGAAGCAGGGATACTGGCGAAGCCATCTGATGGGCAGGCGTTACCACATTTCCGCCTTGTACGTGGTGGACTTGA
    AGAGATTCCGCAAGATTGCGGCAGGAGATAGGCTAAGAGGCCAATACCAGGCACTTAGCCAGGATCCGAACAGCTTATCC
    AATTTGGATCAGGACTTGCCCAACAACATGATCCACCAGGTCGCCATCAAATCCCTGCCCGACGACTGGCTATGGTGCCA
    AACGTGGTGCAGCGACAGCAACTTCAAGACTGCTAAAGTGATTGATTTGTGCAACAACCCGCAGACCAAGGAGGCCAAAC
    TCACGGCCGCCCAGAGGATTGTGCCCGAATGGAAGGACTACGATGCCGAGCTGAAGACCCTGATGTCTCGCATCGAGGAT
    CATGAGAATTCGCATAGCAGGGACTCGGCAGTTGATGATTCGGTTGACGATTCGGTGGAGGTCACCACTGTGACGCCTTC
    TCATGAGCCCAAGCACGGCGAGCTGTGATGAACGCGTAGTTAAATCAACATGTTTAGTGAATTTAAATATCGATGGATAA
    ACACTTGATTACTTAGCTAAGAGCCATCTCCGAAATAACGACTAAACACATTTGTACATTTTAATTAGAACATAATGCGA
    TTGATAACGTAAACCCAACTCAAAAAGAAAACAGCTCACTAAAGTCTGAATTGTGTTTTGTAACTCGATTTCGAACGATT
    TTCTTGTCTTGCATTCCAAGAGCTACTAATTAAGTTAAGCCGAAATTAAATGTCATCATACTAAATACGCGCCTTTAAGT
    TGAAGATTGTCAAATGTATTAAAAGTTGGAGTAAATAGTAATTAATTCAGCGTATTTTATTAACCATTTATTTGGGATGG
    TCAGGCCACTTTACCCCCTCGAAAAGCTTTGGTGACTGCGTATGTGCGTTAGGTGGCAACGCCAAATTCAAATAAAGTTT
    TCAAAAATCTCAGTAAAAAAAAAAAAAAAAAAAA
    
    Library Information (1)
    Library: GH_cDNA
    Description

    Cloned cDNAs prepared from polyadenylated RNA isolated from adult heads.

    Sample preparation

    Adult heads were collected from an isogenic y; cn bw sp (iso-1) strain.

    Protocol

    RNA from adult heads was poly(A)+ selected once. Oligo(dT) primed with XhoI site at end of primer for first strand synthesis; EcoRI adapter on 5' ends of clones; size fractionated on Sephacryl S-500--approximately 1-6kb. cDNA directionally cloned into EcoRI/XhoI-digested Stratagene Uni-Zap XR vector, which allows in vivo excision and recircularization of pBluescript SK(+/-) plasmid.

    Comment

    The GH library is separate from the HL library. Since many of the HL clones were not full length and others lacked inserts, a new adult head library was made.

    Reported As
    Symbol Synonyms
    References (1)
    Review (1)
    Rubin et al., 2000, Science 287(5461): 2222--2224
    A Drosophila complementary DNA resource. [FBrf0127297]
    External Crossreferences and Linkouts ( 2 )
    Linkouts
    DGRC - Stock center for Drosophila cDNAs, vectors, and cell lines
    Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
    Synonyms and Secondary IDs (0)
    Reported As
    Symbol Synonym
    Secondary FlyBase IDs
      References (0)